Gene SaurJH1_1229 details

Gene Information

• Locus tag: SaurJH1_1229
• Symbol: sdhA
• ID: 5316802
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus aureus subsp. aureus JH1
• Kingdom: Bacteria
• Replicon accession: NC_009632
• Strand: +
• Start bp: 1252478
• End bp: 1254244
• Gene Length: 1767 bp
• Protein Length: 588 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640779316
• Product: succinate dehydrogenase flavoprotein subunit
• Protein accession: YP_001316370
• Protein GI: 150393695
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAGA AACATCTTAT TGTTGTCGGA GGTGGCCTAG CGGGCTTAAT GTCAACAATT 
AAAGCGGCAG AAAAAGGTGC ACATGTAGAT TTGTTCTCAG TTGTACCAGT AAAGCGTTCG 
CACTCTGTTT GTGCCCAAGG TGGCATTAAT GGTGCGGTCA ATACTAAAGG GGAAGGCGAT 
TCTCCTTGGA TTCACTTTGA TGATACAGTG TATGGTGGCG ACTTCCTTGC AAACCAACCA 
CCTGTTAAAG CGATGACAGA GGCAGCACCT AAAATTATTC ATTTATTAGA CCGTATGGGT 
GTAATGTTCA ATAGAACAAA TGAAGGTCTA TTAGATTTTA GACGTTTCGG TGGTACATTA 
CACCACAGAA CAGCATATGC AGGGGCAACA ACTGGACAAC AATTATTATA TGCATTGGAT 
GAACAAGTTC GTGCATATGA AGTAGATGGA TTAGTTACGA AGTATGAAGG ATGGGAATTT 
CTTGGCATAG TTAAAGGTGA CGATGATAGT GCAAGAGGTA TCGTTGCACA AAATATGACA 
ACTGCTGAGA TTGAAACATT TGGTTCAGAT GCAGTTATTA TGGCAACGGG TGGCCCTGGT 
ATTATTTTCG GTAAAACAAC AAACTCAATG ATTAATACAG GATCAGCGGC TTCCATTGTT 
TACCAACAAG GCGCTATTTA TGCTAATGGT GAGTTCATTC AAATTCATCC TACTGCAATC 
CCTGGTGATG ATAAACTGCG ACTAATGAGT GAATCAGCAC GTGGTGAAGG TGGACGAATT 
TGGACATATA AAGATGGTAA GCCTTGGTAC TTCTTAGAAG AGAAATATCC TGATTATGGT 
AACTTAGTAC CTCGTGATAT CGCAACGCGT GAAATTTTCG ATGTATGTAT TAACCAAAAA 
TTAGGTATAA ATGGCGAAAA CATGGTATAT CTTGATTTGT CACATAAAGA TCCACATGAG 
TTAGATGTAA AACTAGGTGG TATCATTGAA ATTTATGAAA AATTCACTGG TGATGACCCA 
CGCAAAGTAC CAATGAAGAT TTTCCCAGCT GTTCACTATT CAATGGGTGG TCTATATGTA 
GATTATGATC AAATGACAAA TATTAAAGGG TTATTTGCAG CTGGAGAATG TGACTTCTCT 
CAACATGGTG GTAACCGCTT AGGTGCCAAT TCATTGTTAT CAGCGATTTA TGGTGGTACA 
GTAGCAGGTC CAAACGCGAT TGATTATATT TCAAATATTG ATCGATCATA TACTGATATG 
GACGAAAGTA TTTTTGAAAA ACGTAAAGCT GAAGAGCAAG AACGTTTTGA TAAATTATTA 
GCTATGCGCG GTACAGAAAA TGCCTATAAA TTACACCGTG AACTTGGTGA AATTATGACA 
GCAAATGTAA CTGTTGTTCG TGAAAATGAA AAACTGTTAG AAACAGATAA AAAGATTGTT 
GAATTGATGA AACGTTATGA AGATATTGAT ATGGAAGATA CTCAAACTTG GAGTAACCAA 
GCGGTATTCT TTACCCGTCA ACTATGGAAC ATGTTAGTAC TTGCACGTGT TATTACGATT 
GGTGCATATA ACCGTAACGA ATCACGCGGT GCCCATTATA AACCAGAATT CCCAGAGCGT 
AATGATGAAG AGTGGTTAAA AACGACAATG GCCTCATTCC AAGGCGCATT TGAAAAACCA 
CAGTTTACTT ATGATGACGT CGATGTGAGT TTAATACCAC CTCGTAAACG TGATTACACA 
AGTAAGTCTA AAGGGGGTAA AAAATAA 

 

Protein sequence

MAEKHLIVVG GGLAGLMSTI KAAEKGAHVD LFSVVPVKRS HSVCAQGGIN GAVNTKGEGD 
SPWIHFDDTV YGGDFLANQP PVKAMTEAAP KIIHLLDRMG VMFNRTNEGL LDFRRFGGTL 
HHRTAYAGAT TGQQLLYALD EQVRAYEVDG LVTKYEGWEF LGIVKGDDDS ARGIVAQNMT 
TAEIETFGSD AVIMATGGPG IIFGKTTNSM INTGSAASIV YQQGAIYANG EFIQIHPTAI 
PGDDKLRLMS ESARGEGGRI WTYKDGKPWY FLEEKYPDYG NLVPRDIATR EIFDVCINQK 
LGINGENMVY LDLSHKDPHE LDVKLGGIIE IYEKFTGDDP RKVPMKIFPA VHYSMGGLYV 
DYDQMTNIKG LFAAGECDFS QHGGNRLGAN SLLSAIYGGT VAGPNAIDYI SNIDRSYTDM 
DESIFEKRKA EEQERFDKLL AMRGTENAYK LHRELGEIMT ANVTVVRENE KLLETDKKIV 
ELMKRYEDID MEDTQTWSNQ AVFFTRQLWN MLVLARVITI GAYNRNESRG AHYKPEFPER 
NDEEWLKTTM ASFQGAFEKP QFTYDDVDVS LIPPRKRDYT SKSKGGKK