Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1216 |
Symbol | |
ID | 5316633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1236185 |
End bp | 1236919 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640779303 |
Product | peptidase C60B sortase B |
Protein accession | YP_001316357 |
Protein GI | 150393682 |
COG category | [S] Function unknown |
COG ID | [COG4509] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03064] sortase, SrtB family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAATGA AGCGATTTTT AACTATTGTA CAAATTTTAT TGGTTGTAAT TATTATCATT TTTGGTTACA AAATTGTTCA AACATATATT GAAGACAAGC AAGAACGCGC AAATTATGAG AAATTACAAC AAAAATTTCA AATGCTGATG AGCAAACATC AAGAACATGT GAGACCACAA TTTGAATCAC TTGAAAAAAT AAATAAAGAC ATTGTTGGAT GGATAAAATT ATCAGGAACA TCATTAAATT ATCCAGTACT ACAAGGTAAG ACAAATCACG ATTATTTAAA TTTAGATTTT GAGCGAGAAC ATCGACGTAA AGGTAGTATT TTTATGGATT TTAGAAATGA ATTGAAGAAT TTAAATCATA ATACTATTTT ATACGGGCAC CATGTCGGTG ATAATACGAT GTTTGATGTG TTAGAAGATT ATTTAAAGCA ATCGTTTTAT GAAAAACACA AGATAATTGA ATTTGACAAT AAATATGGTA AATATCAATT GCAAGTATTT AGTGCATATA AAACTACTAC TAAAGATAAT TACATACGTA CAGATTTTGA AAATGATCAA GATTATCAAC AATTTTTAGA TGAGACAAAA CGTAAATCTG TAATTAATTC AGATGTTAAT GTAACGGTAA AAGATAAAAT AATGACTTTA TCAACGTGCG AAGATGCATA TAGTGAAACA ACGAAAAGAA TTGTTGTTGT CGCAAAAATA ATTAAGGTAA GTTAA
|
Protein sequence | MRMKRFLTIV QILLVVIIII FGYKIVQTYI EDKQERANYE KLQQKFQMLM SKHQEHVRPQ FESLEKINKD IVGWIKLSGT SLNYPVLQGK TNHDYLNLDF EREHRRKGSI FMDFRNELKN LNHNTILYGH HVGDNTMFDV LEDYLKQSFY EKHKIIEFDN KYGKYQLQVF SAYKTTTKDN YIRTDFENDQ DYQQFLDETK RKSVINSDVN VTVKDKIMTL STCEDAYSET TKRIVVVAKI IKVS
|
| |