Gene SaurJH1_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_1216 
Symbol 
ID5316633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp1236185 
End bp1236919 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content27% 
IMG OID640779303 
Productpeptidase C60B sortase B 
Protein accessionYP_001316357 
Protein GI150393682 
COG category[S] Function unknown 
COG ID[COG4509] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03064] sortase, SrtB family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATGA AGCGATTTTT AACTATTGTA CAAATTTTAT TGGTTGTAAT TATTATCATT 
TTTGGTTACA AAATTGTTCA AACATATATT GAAGACAAGC AAGAACGCGC AAATTATGAG
AAATTACAAC AAAAATTTCA AATGCTGATG AGCAAACATC AAGAACATGT GAGACCACAA
TTTGAATCAC TTGAAAAAAT AAATAAAGAC ATTGTTGGAT GGATAAAATT ATCAGGAACA
TCATTAAATT ATCCAGTACT ACAAGGTAAG ACAAATCACG ATTATTTAAA TTTAGATTTT
GAGCGAGAAC ATCGACGTAA AGGTAGTATT TTTATGGATT TTAGAAATGA ATTGAAGAAT
TTAAATCATA ATACTATTTT ATACGGGCAC CATGTCGGTG ATAATACGAT GTTTGATGTG
TTAGAAGATT ATTTAAAGCA ATCGTTTTAT GAAAAACACA AGATAATTGA ATTTGACAAT
AAATATGGTA AATATCAATT GCAAGTATTT AGTGCATATA AAACTACTAC TAAAGATAAT
TACATACGTA CAGATTTTGA AAATGATCAA GATTATCAAC AATTTTTAGA TGAGACAAAA
CGTAAATCTG TAATTAATTC AGATGTTAAT GTAACGGTAA AAGATAAAAT AATGACTTTA
TCAACGTGCG AAGATGCATA TAGTGAAACA ACGAAAAGAA TTGTTGTTGT CGCAAAAATA
ATTAAGGTAA GTTAA
 
Protein sequence
MRMKRFLTIV QILLVVIIII FGYKIVQTYI EDKQERANYE KLQQKFQMLM SKHQEHVRPQ 
FESLEKINKD IVGWIKLSGT SLNYPVLQGK TNHDYLNLDF EREHRRKGSI FMDFRNELKN
LNHNTILYGH HVGDNTMFDV LEDYLKQSFY EKHKIIEFDN KYGKYQLQVF SAYKTTTKDN
YIRTDFENDQ DYQQFLDETK RKSVINSDVN VTVKDKIMTL STCEDAYSET TKRIVVVAKI
IKVS