| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1183 |
|---|
| Symbol | |
|---|
| ID | 5315566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 1203209 |
|---|
| End bp | 1204018 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640779270 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001316324 |
|---|
| Protein GI | 150393649 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000422774 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGT ATGGAAAGCT GTATATCGGG ATACTTTTAG CGATTTTATA CATCCCAATA
TTCTTTTTAA TGTTCTATTC ATTCAATTCG GCTGGTAATA TGATTCACTT TGAACATTTT
ACATTAGAGC ATTATCAATC ATTATTTCAA AATGATCATT TAATGTCGGT CATTTTTAAT
ACGATAGCTG TAGCACTTTT AGCAGCCTCA ATTTCTACAG TTATTGGTAC ATTTGGTGCC
ATTGCTATTT ATTATTTAAG AAATAAAAAG TTTAAAGTAA CTTTACTAAC ATTGAATAAT
GTCTTGATGG TATCATCCGA CGTTGTCATA GGTGCATCAT TCTTAATTAT GTTTACAACG
ATTGGCCATT TTACTGGTCT TGGTTTAGGA TTTTGGACAG TTCTAATATC TCATATTGCA
TTTTGCATAC CTATAGTTGT GATTATCGTC TTACCACAAC TGTATGAAAT GAATAATAAT
ATGTTAAATG CTGCAAGAGA TTTAGGAGCG ACTGAACCAC AATTATTAAG CAACATTATT
ATTCCTAATA TTTTACCTTC TATTATAGGA GGTTTCTTTA TGGCTTTAAC TTATTCACTA
GACGATTTCA CAGTAAGTTT CTTCGTTACT GGTAATGGCT TTAGTGTGTT ATCAGTTGAA
GTTTATGCTA TGGCGAGAAA AGGAATTAGT ATGGAAATTA ATGCGATTTC AACATTATTG
TTTGCTGTTA TTGTATTAGG AATACTAGGA TATTATTTGA TTCAATACGT GATAAATAAG
AAAAAACTAA TCAAGCGAGG TGTAAAATAA
|
|---|
| Protein sequence | MKWYGKLYIG ILLAILYIPI FFLMFYSFNS AGNMIHFEHF TLEHYQSLFQ NDHLMSVIFN
TIAVALLAAS ISTVIGTFGA IAIYYLRNKK FKVTLLTLNN VLMVSSDVVI GASFLIMFTT
IGHFTGLGLG FWTVLISHIA FCIPIVVIIV LPQLYEMNNN MLNAARDLGA TEPQLLSNII
IPNILPSIIG GFFMALTYSL DDFTVSFFVT GNGFSVLSVE VYAMARKGIS MEINAISTLL
FAVIVLGILG YYLIQYVINK KKLIKRGVK
|
|---|
| |