| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1159 |
|---|
| Symbol | |
|---|
| ID | 5316425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | - |
|---|
| Start bp | 1179835 |
|---|
| End bp | 1180410 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640779246 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001316300 |
|---|
| Protein GI | 150393625 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4721] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAG GTTTAAAGCT ATCTGAAATA CTAGTAACCG TACTTATTTC AGTAGTATTC
GCAGTTATTT ACAATTTATG GTGGTTTGTT TACAATGGTG TGCAAGCTAC AGGCCTTCAC
CTCGAACAAT TAACAAACGG GGTTTGGTTC ATGGCAGCGA TTGTCTGCTA TCTAATTATT
CCAAAACCAG GTATTGCTTT ACTGGCTGAA TTTGCTGCAG GTGCCGGCGA AACTATCATT
ATGGGTCGTT TCGATATTCC GACAATCGTT TACGCTTTCA TACAAGGTTT AGCGTGTGAA
CTTGTCTTTG CAATTTTTAA ATATCAATCT CGTTCAGTTA TGGTAGCTAT GTTAGCAGGT
TTTTGTACAG CAATCGCGGC TTTCCCTATA GATTATTTCT ATGGTTATTT AAATGAAGTT
GCAGGTTGGA ACTTAACATT ATTCATCGTA TTTAGATTAA TTAGTGGTGC AGTAGTCGCC
GGCGTCCTAT CTTACCTTTT AGTAAAAGCT TTAGATAAGA CAGGCGTAAC AAAATTATTT
AGACCAGCTG CTAAAGAAGA TTACGACAAC TTATAA
|
|---|
| Protein sequence | MSKGLKLSEI LVTVLISVVF AVIYNLWWFV YNGVQATGLH LEQLTNGVWF MAAIVCYLII
PKPGIALLAE FAAGAGETII MGRFDIPTIV YAFIQGLACE LVFAIFKYQS RSVMVAMLAG
FCTAIAAFPI DYFYGYLNEV AGWNLTLFIV FRLISGAVVA GVLSYLLVKA LDKTGVTKLF
RPAAKEDYDN L
|
|---|
| |