Gene SaurJH1_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_1115 
Symbol 
ID5317062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp1134137 
End bp1134778 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content28% 
IMG OID640779203 
ProductABC transporter related 
Protein accessionYP_001316257 
Protein GI150393582 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000285067 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAT TAAAAGATTT AACCATACAA AAAGGTAATA TACATATTTT GAAGAAACTT 
AATTTGAAAT TTCAATGTGG AAAATCATAT GCACTTATTG GTAAAAGTGG ATGCGGTAAA
TCTACATTAT TAAATACTAT TGCTGGACTT GAAAAAACGG GGAAACAATA TGTCTATTTT
AATGGTCAAT TAGAACAATT TAAATCTAAT TTTTACAGAG ATAAATTAGG ATATTTATTT
CAAAATTATG GATTAATCGA TAATTTGACA GTAAATGAAA ATTTAGATAT TGGATTAGCA
TATAAAAAAA TAAGTAAGAA AGAAAAAGAA CAATTAAAGA TACGTTATAT AGAACAGTTT
GGTCTGTCAA ACAGTTTAAA AAGAAAAGTT CATACGCTAA GTGGAGGTGA ACAACAACGT
GTCGCTTTAA TTAGAATGAT GTTAAAAGAT CCGATTGTTA TGTTAGCTGA TGAACCAACG
GGTGCGTTAG ATCCTAAAAC AGGACAGATG ATTATTCAAT CATTATTTGA TTTGGTCGAT
GAAAATAAAG TGCTGATTTT AGCAACACAT GATATGGCTA TTGCAAATCA ATGTGACGAA
ATAATAGATT TAGAACAGTA TAGTAAAGTA GCATCTATGT GA
 
Protein sequence
MIELKDLTIQ KGNIHILKKL NLKFQCGKSY ALIGKSGCGK STLLNTIAGL EKTGKQYVYF 
NGQLEQFKSN FYRDKLGYLF QNYGLIDNLT VNENLDIGLA YKKISKKEKE QLKIRYIEQF
GLSNSLKRKV HTLSGGEQQR VALIRMMLKD PIVMLADEPT GALDPKTGQM IIQSLFDLVD
ENKVLILATH DMAIANQCDE IIDLEQYSKV ASM