Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1037 |
Symbol | prfC |
ID | 5315133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1073229 |
End bp | 1074791 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640779124 |
Product | peptide chain release factor 3 |
Protein accession | YP_001316180 |
Protein GI | 150393505 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00273811 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTTAA AGCAAGAAGT TGAGTCTAGA AAGACTTTTG CGATTATTTC ACATCCCGAT GCAGGGAAAA CAACGTTAAC TGAAAAACTA TTGTACTTCA GTGGTGCTAT TCGTGAAGCG GGTACAGTTA AAGGGAAGAA GACTGGTAAA TTTGCGACAA GTGACTGGAT GAAAGTTGAA CAAGAGCGTG GTATTTCTGT AACTAGTTCA GTAATGCAAT TTGATTACGA TGATTATAAA ATCAATATCT TAGATACACC AGGACATGAA GACTTTTCAG AAGATACGTA TAGAACATTA ATGGCAGTTG ACAGTGCTGT CATGGTCATA GACTGTGCAA AAGGTATTGA ACCACAAACA TTGAAGTTAT TTAAAGTTTG TAAAATGCGT GGTATTCCAA TCTTTACATT CATTAATAAA TTAGACCGAG TAGGTAAAGA ACCATTTGAA TTATTAGATG AAATCGAAGA GACATTAAAT ATTGAAACAT ACCCTATGAA TTGGCCAATT GGTATGGGAC AAAGTTTCTT TGGCATCATT GATAGAAAGT CTAAAACAAT TGAACCATTT AGAGATGAAG AAAATATATT ACATTTGAAT GATGATTTTG AGTTGGAAGA AGATCATGCA ATTACAAATG ATAGTGCTTT TGAACAAGCG ATTGAAGAAT TAATGTTGGT TGAAGAAGCG GGTGAAGCCT TTGATAATGA CGCGCTGTTG AGTGGAGACT TAACACCTGT ATTTTTCGGT TCAGCTTTAG CTAACTTTGG TGTACAAAAT TTCTTAAATG CATATGTTGA TTTTGCGCCA ATGCCAAATG CGAGACAAAC AAAAGAAGAC GTTGAAGTAA GCCCGTTTGA TGATTCATTT TCAGGATTTA TCTTTAAAAT TCAAGCCAAC ATGGACCCTA AACACCGTGA TAGAATTGCC TTTATGCGTG TCGTTAGTGG TGCATTTGAA CGTGGTATGG ATGTTACTTT GCAACGTACT AATAAAAAGC AAAAGATCAC ACGTTCAACG TCATTTATGG CAGACGATAA AGAAACTGTG AATCATGCTG TAGCAGGCGA TATCATTGGA CTATATGATA CTGGTAATTA TCAAATTGGA GATACTTTAG TTGGTGGAAA ACAAACCTAC AGTTTCCAAG ATTTACCACA ATTTACGCCA GAAATTTTTA TGAAAGTTTC TGCTAAAAAC GTCATGAAAC AGAAGCATTT CCATAAAGGT ATTGAACAAT TAGTACAAGA AGGTGCGATT CAATACTATA AAACATTACA CACAAACCAA ATTATTTTAG GTGCTGTTGG TCAGTTACAA TTTGAAGTTT TCGAACATAG AATGAAAAAC GAATATAATG TTGATGTTGT TATGGAGCCA GTAGGCCGTA AAATTGCACG TTGGATTGAA AATGAAGACC AAATTACAGA TAAGATGAAC ACATCAAGAT CGATTTTAGT GAAAGATAGA TATGACGATT TAGTATTCTT ATTTGAAAAT GAATTTGCAA CAAGATGGTT TGAAGAGAAA TTCCTTGAAA TTAAATTGTA TAGTTTACTT TAA
|
Protein sequence | MNLKQEVESR KTFAIISHPD AGKTTLTEKL LYFSGAIREA GTVKGKKTGK FATSDWMKVE QERGISVTSS VMQFDYDDYK INILDTPGHE DFSEDTYRTL MAVDSAVMVI DCAKGIEPQT LKLFKVCKMR GIPIFTFINK LDRVGKEPFE LLDEIEETLN IETYPMNWPI GMGQSFFGII DRKSKTIEPF RDEENILHLN DDFELEEDHA ITNDSAFEQA IEELMLVEEA GEAFDNDALL SGDLTPVFFG SALANFGVQN FLNAYVDFAP MPNARQTKED VEVSPFDDSF SGFIFKIQAN MDPKHRDRIA FMRVVSGAFE RGMDVTLQRT NKKQKITRST SFMADDKETV NHAVAGDIIG LYDTGNYQIG DTLVGGKQTY SFQDLPQFTP EIFMKVSAKN VMKQKHFHKG IEQLVQEGAI QYYKTLHTNQ IILGAVGQLQ FEVFEHRMKN EYNVDVVMEP VGRKIARWIE NEDQITDKMN TSRSILVKDR YDDLVFLFEN EFATRWFEEK FLEIKLYSLL
|
| |