Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_0986 |
Symbol | |
ID | 5315653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1014867 |
End bp | 1018520 |
Gene Length | 3654 bp |
Protein Length | 1217 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640779073 |
Product | recombination helicase AddA |
Protein accession | YP_001316129 |
Protein GI | 150393454 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0857621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATTC CAGAGAAACC ACAAGGCGTG ATTTGGACTG ACGCGCAATG GCAAAGTATT TACGCAACTG GACAAGATGT ACTTGTTGCA GCCGCGGCAG GTTCAGGTAA AACAGCTGTA CTAGTTGAGC GTATTATCCA AAAGATTTTA CGTGATGGCA TTGATGTCGA TCGACTTTTA GTCGTAACGT TTACAAACTT AAGCGCACGT GAAATGAAGC ATCGTGTAGA CCAACGTATT CAAGAGGCAT CGATTGCTGA TCCTGCAAAT GCACACTTGA AAAACCAACG CATCAAAATT CATCAAGCAC AAATATCTAC ACTTCATAGT TTTTGCTTGA AATTAATTCA ACAGCATTAT GATGTATTAA ATATTGACCC GAACTTTAGA ACAAGCAGTG AAGCTGAAAA TATTTTATTA TTAGAACAAA CGATAGATGA GGTCATAGAA CAACATTACG ATATCCTTGA TCCTGCTTTT ATTGAATTAA CAGAACAATT GTCTTCAGAT AGAAGTGATG ATCAGTTTCG AATGATTATT AAACAATTGT ATTTCTTTAG CGTTGCAAAT CCAAATCCTA CAAATTGGTT GGATCAATTG GTGACACCAT ACGAAGAAGA AGCACAACAA GCGCAACTTA TTCAACTACT AACAGACTTA TCTAAAGTAT TTATCACAGC TGCCTATGAT GCTTTAAATA AGGCGTATGA TTTGTTTAGT ATGATGGATG GCGTCGATAA ACATTTAGCT GTTATAGAAG ATGAACGACG TTTAATGGGG CGTGTTTTAG AAGGTGGTTT TATTGATATA CCTTATTTAA CTGATCACGA ATTTGGCGCG CGTTTGCCTA ATGTAACAGC GAAAATTAAA GAAGCAAATG AAATGATGGT CGATGCCTTA GAAGATGCTA AACTTCAGTA TAAAAAATAT AAATCATTAA TTGATAAAGT GAAAAATGAT TACTTTTCAA GAGAAGCTGA TGATTTGAAA GCTGATATGC AACAATTGGC GCCACGAGTA AAGTACCTTG CGCGTATTGT GAAAGATGTT ATGTCAGAAT TCAATCGAAA AAAGCGTAGC AAAAATATTC TGGATTTTTC TGATTATGAA CATTTTGCAT TACAAATTTT AACTAATGAG GATGGTTCGC CTTCAGAAAT TGCCGAATCA TACCGTCAAC ACTTTCAAGA AATATTGGTC GATGAGTATC AAGATACGAA CCGGGTTCAA GAGAAAATAC TATCTTGCAT CAAAACGGGT GATGAACATA ATGGTAATTT ATTTATGGTT GGAGATGTTA AGCAATCCAT TTATAAATTT AGACAAGCTG ATCCAAGTTT ATTTATTGAA AAGTATCAAC GCTTTACTAT AGATGGAGAT GGCACTGGAC GTCGAATTGA TTTGTCGCAA AACTTCCGTT CTCGAAAAGA AGTACTGTCA ACGACTAACT ATATATTCAA ACATATGATG GATGAACAAG TCGGTGAAGT AAAATATGAT GAAGCGGCAC AGTTGTATTA TGGTGCACCA TATGATGAAT CGGACCATCC AGTAAACTTA AAAGTGCTTG TTGAAGCGGA TCAAGAACAT AGTGATTTAA CTGGTAGTGA ACAAGAAGCG CATTTTATAG TAGAACAAGT TAAAGATATC TTAGAACATC AAAAAGTTTA TGATATGAAA ACAGGAAGCT ATAGAAGTGC GACATACAAA GATATCGTTA TTCTAGAACG CAGCTTTGGA CAAGCTCGCA ATTTACAACA AGCCTTTAAA AATGAAGATA TTCCATTCCA TGTGAATAGT CGTGAAGGTT ACTTTGAACA AACAGAAGTC CGCTTAGTAT TATCATTTTT AAGAGCGATA GATAATCCAT TACAAGATAT TTATTTAGTT GGGTTAATGC GCTCCGTTAT ATATCAGTTC AAAGAAGACG AATTAGCTCA AATTAGAATA TTGAGTCCAA ATGATGACTA CTTCTATCAA TCGATTGTAA ATTACATTAA TGACGAAGCA GCAGATGCTA TTTTAGTTGA TAAATTAAAA ATGTTTTTAT CAGATATTCA AAGTTACCAA CAATATAGTA AAGATCATCC GGTGTATCAG TTAATTGATA AATTTTATAA TGATCATTAT GTTATTCAAT ACTTTAGTGG ACTTATTGGT GGACGTGGAC GACGTGCAAA CCTTTATGGT TTATTTAATA AAGCTATCGA GTTTGAGAAT TCAAGTTTTA GAGGTTTATA TCAATTTATT CGTTTTATCG ATGAATTGAT TGAAAGAGGC AAAGATTTTG GTGAGGAAAA TGTAGTTGGT CCAAACGATA ATGTTGTTAG AATGATGACA ATTCATAGTA GTAAAGGTCT AGAGTTTCCA TTTGTCATTT ATTCTGGATT GTCAAAAGAT TTTAATAAAC GTGATTTGAA ACAACCAGTT ATTTTAAATC AGCAATTTGG TCTCGGAATG GATTATTTTG ATGTGGATAA AGAAATGGCA TTTCCATCTT TAGCTTCGGT TGCATATAAA GCTGTTGCCG AAAAAGAACT TGTGTCAGAA GAAATGCGAT TAGTCTATGT AGCATTAACA AGAGCGAAAG AACAACTTTA TTTAATTGGT AGAGTGAAAA ATGATAAATC GTTACTAGAA CTAGAGCAAT TGTCTATTTC TGGTGAGCAC ATTGCTGTCA ATGAACGATT AACTTCACCA AATCCGTTCC ATCTTATTTA TAGTATTTTA TCTAAACATC AATCTGCGTC AATTCCAGAT GATTTAAAAT TTGAAAAAGA TATAGCACAA GTTGAAGATA GTAGTCGTCC GAATGTAAAT ATTTCAATTA TATACTTTGA AGATGTGTCT ACAGAAACCA TTTTAGATAA TAATGAATAT CGTTCGGTTA ATCAATTAGA AACTATGCAA AATGGTAATG AGGATGTTAA AGCACAAATT AAACACCAAC TTGATTATCA ATATCCATAT GTAAATGATA CTAAAAAGCC ATCAAAACAA TCTGTTTCTG AATTGAAAAG GCAATATGAA ACAGAAGAAA GTGGCACAAG TTACGAACGA GTAAGACAAT ATCGTATCGG TTTTTCAACG TATGAACGAC CTAAATTTCT AAGTGAACAA GGTAAACGAA AAGCGAATGA AATTGGTACG TTAATGCATA CAGTGATGCA ACATTTACCA TTCAAAAAAG AACGCATATC TGAAGTTGAG TTACATCAGT ATATCGATGG ATTAATCGAT AAACATATTA TCGAAGCAGA TGCGAAAAAA GATATCCGTA TGGATGAAAT AATGACATTT ATCAATAGTG AGTTATATTC GATTATTGCT GAAGCAGAGC AAGTTTATCG TGAATTACCG TTTGTAGTTA ACCAAGCATT AGTTGACCAA TTGCCACAAG GAGACGAAGA CGTCTCAATT ATTCAAGGTA TGATTGACTT AATCTTTGTT AAAGATGGTG TGCATTATTT TGTAGACTAT AAAACCGATG CATTTAATCG TCGCCGTGGG ATGACAGATG AAGAAATTGG TACACAATTA AAAAATAAAT ATAAGATACA GATGAAATAT TATCAAAATA CGCTTCAAAC GATACTTAAT AAAGAAGTTA AAGGTTATTT ATACTTCTTC AAATTTGGTA CATTGCAACT GTAG
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Protein sequence | MTIPEKPQGV IWTDAQWQSI YATGQDVLVA AAAGSGKTAV LVERIIQKIL RDGIDVDRLL VVTFTNLSAR EMKHRVDQRI QEASIADPAN AHLKNQRIKI HQAQISTLHS FCLKLIQQHY DVLNIDPNFR TSSEAENILL LEQTIDEVIE QHYDILDPAF IELTEQLSSD RSDDQFRMII KQLYFFSVAN PNPTNWLDQL VTPYEEEAQQ AQLIQLLTDL SKVFITAAYD ALNKAYDLFS MMDGVDKHLA VIEDERRLMG RVLEGGFIDI PYLTDHEFGA RLPNVTAKIK EANEMMVDAL EDAKLQYKKY KSLIDKVKND YFSREADDLK ADMQQLAPRV KYLARIVKDV MSEFNRKKRS KNILDFSDYE HFALQILTNE DGSPSEIAES YRQHFQEILV DEYQDTNRVQ EKILSCIKTG DEHNGNLFMV GDVKQSIYKF RQADPSLFIE KYQRFTIDGD GTGRRIDLSQ NFRSRKEVLS TTNYIFKHMM DEQVGEVKYD EAAQLYYGAP YDESDHPVNL KVLVEADQEH SDLTGSEQEA HFIVEQVKDI LEHQKVYDMK TGSYRSATYK DIVILERSFG QARNLQQAFK NEDIPFHVNS REGYFEQTEV RLVLSFLRAI DNPLQDIYLV GLMRSVIYQF KEDELAQIRI LSPNDDYFYQ SIVNYINDEA ADAILVDKLK MFLSDIQSYQ QYSKDHPVYQ LIDKFYNDHY VIQYFSGLIG GRGRRANLYG LFNKAIEFEN SSFRGLYQFI RFIDELIERG KDFGEENVVG PNDNVVRMMT IHSSKGLEFP FVIYSGLSKD FNKRDLKQPV ILNQQFGLGM DYFDVDKEMA FPSLASVAYK AVAEKELVSE EMRLVYVALT RAKEQLYLIG RVKNDKSLLE LEQLSISGEH IAVNERLTSP NPFHLIYSIL SKHQSASIPD DLKFEKDIAQ VEDSSRPNVN ISIIYFEDVS TETILDNNEY RSVNQLETMQ NGNEDVKAQI KHQLDYQYPY VNDTKKPSKQ SVSELKRQYE TEESGTSYER VRQYRIGFST YERPKFLSEQ GKRKANEIGT LMHTVMQHLP FKKERISEVE LHQYIDGLID KHIIEADAKK DIRMDEIMTF INSELYSIIA EAEQVYRELP FVVNQALVDQ LPQGDEDVSI IQGMIDLIFV KDGVHYFVDY KTDAFNRRRG MTDEEIGTQL KNKYKIQMKY YQNTLQTILN KEVKGYLYFF KFGTLQL
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