Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_0978 |
Symbol | |
ID | 5315883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 1003783 |
End bp | 1004712 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640779065 |
Product | glycerophosphodiester phosphodiesterase |
Protein accession | YP_001316121 |
Protein GI | 150393446 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.515324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAACT CTTCGAAAAG CTTCACTAAA TTTATGGCTG CTTCTGCTGT TTTTACTATG GGATTTTTAT CAGTACCTAC TGCTGGCGCT GAACAAACAA ATCAAATTGC AAATAAACCT CAGGCTATTC AATGGCATAC AAATTTAACG AATGAGCGAT TCACTACTAT CGCACATCGT GGCGCAAGTG GCTATGCACC AGAGCATACG TTTCAAGCAT ATGATAAGAG TCATAATGAG TTAAAAGCAT CTTATATCGA AATTGATTTA CAACGTACCA AAGATGGACA TTTAGTTGCT ATGCATGATG AAACTGTTAA CCGTACAACA AATGGACACG GTAAAGTTGA GGATTATACC CTTGATGAAT TAAAACAGTT AGATGCAGGA AGTTGGTTTA ATAAAAAATA TCCAAAATAC GCAAGAGCAA GTTATAAAAA TGCTAAAGTA CCCACTTTAG ATGAAATTTT AGAACGTTAT GGCCCGAATG CAAACTATTA TATTGAAACA AAGTCACCTG ATGTATACCC AGGAATGGAA GAACAATTAT TAGCTTCATT GAAAAAGCAT CACCTTTTAA ATAACAATAA ATTAAAAAAT GGACATGTAA TGATTCAATC ATTTTCTGAC GAAAGTTTAA AGAAAATTCA TCGTCAAAAT AAGCATGTGC CATTAGTAAA ATTAGTTGAT AAAGGTGAAC TACAACAATT TAACGACCAA CGCTTAAAAG AGATACGCTC TTATGCGATT GGATTAGGTC CTGATTATAC AGATTTAACT GAACAAAATA CCCATCATTT AAAAGACTTA GGATTTATAG TACATCCTTA TACAGTGAAT GAAAAAGCTG ATATGTTACG ATTAAATAAA TATGGCGTTG ATGGTGTCTT TACAAATTTC GCTGATAAAT ATAAAGAAGT CATTAAGTAG
|
Protein sequence | MTNSSKSFTK FMAASAVFTM GFLSVPTAGA EQTNQIANKP QAIQWHTNLT NERFTTIAHR GASGYAPEHT FQAYDKSHNE LKASYIEIDL QRTKDGHLVA MHDETVNRTT NGHGKVEDYT LDELKQLDAG SWFNKKYPKY ARASYKNAKV PTLDEILERY GPNANYYIET KSPDVYPGME EQLLASLKKH HLLNNNKLKN GHVMIQSFSD ESLKKIHRQN KHVPLVKLVD KGELQQFNDQ RLKEIRSYAI GLGPDYTDLT EQNTHHLKDL GFIVHPYTVN EKADMLRLNK YGVDGVFTNF ADKYKEVIK
|
| |