| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_0948 |
|---|
| Symbol | |
|---|
| ID | 5315361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 975732 |
|---|
| End bp | 976691 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640779035 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001316091 |
|---|
| Protein GI | 150393416 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTAAAAA TAGTTGTTTC GAGGAAAATT CCAGATAAAT TTTATCAACA ATTAAGTAAA
CTTGGTGACG TTGTTATGTG GCAAAAATCA TTAGTGCCTA TGCCTAAAGA TCAATTTGTG
ACAGCACTTC GTGACGCAGA TGCTTGTTTT ATTACATTAA GTGAACAGAT CGATGCAGAA
ATTTTAGCAC AATCACCAAA TTTAAAAGTA ATTGCGAATA TGGCTGTAGG ATATGACAAC
ATCGATGTTG AAAGTGCAAC AGCGAATAAC GTGGTTGTCA CGAATACACC AAATGTACTT
ACTGAAACAA CTGCAGAATT AGGATTTACA TTAATGCTTG CTATAGCACG CCGTATTGTA
GAAGCTGAAA AATATGTAGA AGCAGATGCA TGGCAAAGCT GGGGTCCTTA TTTATTGTCA
GGTAAAGATG TCTTCAATTC AACTATTGGA ATATATGGTA TGGGAGATAT TGGTAAAGCT
TTTGCAAGAA GGTTGCAAGG GTTTAATACT AATATTCTTT ATCATAATCG ATCAAGACAT
AAAGATGCAG AGGCGGACTT TAATGCAACA TATGTTTCTT TTGAAACGTT GTTAGCAGAA
AGTGATTTTA TCATCTGTAC AGCGCCACTT ACAAAAGAAA CACATCATAA ATTTAATGCT
GAAGCATTTG AACAAATGAA AAATGATGCA ATTTTTATTA ATATCGGTAG AGGGCAAATT
GTAGATGAAA CAGCATTAAT CGATGCACTA GACAATAAAG AAATTTTAGC ATGTGGTTTA
GATGTATTAG CAAATGAACC GATTGATCAT ACACATCCAT TAATGGGACG TGATAATGTT
CTGATTACAC CACACATTGG TAGCGCATCA GTAACAACAC GGGACAATAT GATTCAATTA
TGTATTAATA ATATAGAAGC GGTTATGACA AATCAGGTAC CACATACTCC AGTAAATTGA
|
|---|
| Protein sequence | MVKIVVSRKI PDKFYQQLSK LGDVVMWQKS LVPMPKDQFV TALRDADACF ITLSEQIDAE
ILAQSPNLKV IANMAVGYDN IDVESATANN VVVTNTPNVL TETTAELGFT LMLAIARRIV
EAEKYVEADA WQSWGPYLLS GKDVFNSTIG IYGMGDIGKA FARRLQGFNT NILYHNRSRH
KDAEADFNAT YVSFETLLAE SDFIICTAPL TKETHHKFNA EAFEQMKNDA IFINIGRGQI
VDETALIDAL DNKEILACGL DVLANEPIDH THPLMGRDNV LITPHIGSAS VTTRDNMIQL
CINNIEAVMT NQVPHTPVN
|
|---|
| |