Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_0708 |
Symbol | |
ID | 5316105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 762954 |
End bp | 763670 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640778794 |
Product | hypothetical protein |
Protein accession | YP_001315852 |
Protein GI | 150393177 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.934731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACGTA AATGGAATAA CATTAAAGAA AAAAAGGCCC AAAAAGATAA AAACACAAGT AGAATATATG CGAAATTTGG TAAGGAGATT TATGTTGCAG CAAAATCTGG TGAACCCAAT CCAGAATCTA ACCAAGCTTT AAGGTTGGTG CTTGAACGCG CTAAGACATA TTCAGTGCCG AATCATATTA TTGAAAAAGC AATAGATAAA GCTAAGGGTG CTGGAGACGA AAACTTTGAT CACCTAAGAT ATGAAGGATT TGGCCCAAGC GGATCAATGC TAATTGTTGA TGCGTTAACA AATAATGTAA ATCGTACTGC CTCTGATGTG CGAGCTGCTT TTGGTAAAAA CGGCGGTAAT ATGGGTGTAT CTGGATCAGT TGCTTATATG TTTGATCATG TGGCAACATT TGGTATTGAA GGAAAGTCTG TTGACGAAAT ACTTGAAACA TTAATGGAAC AAGATGTAGA TGTAAATGAT GTGATTGACG ATAATGGATT GACAATAGTC TATGCTGAAC CAGATCAATT TGCAGTCGTT CAAGATGCGC TTCGTGCAGC AGGTGTTGAA GAATTTAAAG TTGCTGAATT TGAAATGTTA CCTCAAACAG ATATTGAACT TTCTGAAGCG GACCAAGTAA CATTTGAAAA ATTAATCGAT GCATTAGAAG ATTTAGAAGA TGTACAAAAC GTATTCCATA ATGTGGATTT GAAATAA
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Protein sequence | MGRKWNNIKE KKAQKDKNTS RIYAKFGKEI YVAAKSGEPN PESNQALRLV LERAKTYSVP NHIIEKAIDK AKGAGDENFD HLRYEGFGPS GSMLIVDALT NNVNRTASDV RAAFGKNGGN MGVSGSVAYM FDHVATFGIE GKSVDEILET LMEQDVDVND VIDDNGLTIV YAEPDQFAVV QDALRAAGVE EFKVAEFEML PQTDIELSEA DQVTFEKLID ALEDLEDVQN VFHNVDLK
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