Gene SaurJH1_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_0578 
Symbol 
ID5317875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand+ 
Start bp619196 
End bp619804 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content34% 
IMG OID640778665 
Producthypothetical protein 
Protein accessionYP_001315723 
Protein GI150393048 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00141674 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATT ATTACGATGA AGATCCAAGT GTAATTAGCA ATGAACAACG TATTCAATAT 
CAATTAAACC ATCATAAAAT TGATTTAATA ACTGATAACG GAGTGTTTTC GAAAGATAAA 
GTAGATTATG GTTCAGATGT TCTTGTTCAA ACTTTTTTAA AAGCGCATCC ACCTGGTCCA 
AGTAAGCGAA TTGCCGATGT TGGTTGTGGT TACGGACCAA TTGGTTTGAT GATTGCTAAA 
GTATCACCAC ATCATTCAAT TACAATGCTA GATGTTAATC ACAGAGCGCT AGCCTTAGTT 
GAAAAAAACA AAAAATTAAA TGGTATTGAT AATGTGATCG TAAAGGAAAG TGATGCTTTG 
TCTGCTGTGG AAGACAAAAG TTTTGATTTT ATTTTAACCA ATCCACCAAT AAGAGCAGGG 
AAAGAAACCG TGCATCGTAT ATTCGAGCAA GCATTACATA GATTAGACTC GAACGGTGAA 
CTATTCGTTG TAATTCAGAA GAAGCAAGGT ATGCCATCTG CAAAGAAAAG AATGAATGAA 
CTTTTTGGAA ATGTAGAAGT GGTAAATAAA GATAAAGGAT ATTACATTCT GAGAAGTATA 
AAAGCTTGA
 
Protein sequence
MSHYYDEDPS VISNEQRIQY QLNHHKIDLI TDNGVFSKDK VDYGSDVLVQ TFLKAHPPGP 
SKRIADVGCG YGPIGLMIAK VSPHHSITML DVNHRALALV EKNKKLNGID NVIVKESDAL 
SAVEDKSFDF ILTNPPIRAG KETVHRIFEQ ALHRLDSNGE LFVVIQKKQG MPSAKKRMNE 
LFGNVEVVNK DKGYYILRSI KA