Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_0570 |
Symbol | |
ID | 5317867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 614710 |
End bp | 615279 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640778657 |
Product | hypothetical protein |
Protein accession | YP_001315715 |
Protein GI | 150393040 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00711929 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAATATG ATTTGACAAC TCAAGACAGT ACAATCAAAC GTAACAATTC AATAAATGAT AAAGACTTCG AAAAGTTAGT AATGGATCTA CAACCATTAA TTATTCGACG CATCAAAACA TTTGGATTTA ATCATTATGA TTTAGAAGAC TTATATCAAG AAATACTTAT ACGGATGTAT AGGTCGGTCC AAACATTTGA TTTTAGTGGA GAGCAGCCTT TCACAAATTA TGTTCAATGT TTAATTACGT CTGTAAAGTA TGATTATTTG AGAAAATATT TAGCTACAAA TAAAAGAATG GATAATTTGA TTAATGAATA TAGAGTTACG TATCCATGTG CAATAAAGCG TTTTGATGTT GAAAACAATT ATTTGAATAA ATTAGCAATT AAAGAGTTGA TTTGTCAGTT TAAGTATTTG AGTGCATTTG AAAAAGATGT CATGTATTTA ATGTGTGAAC AATATAAGCC GAGAGAAATT GCTCAATTGA TGCATGTAAA AGAGAAAGTG ATTTATAATG CCATACAACG ATGTAAAAAT AAAATAAAAC GTTATTTCAA AATGATTTGA
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Protein sequence | MKYDLTTQDS TIKRNNSIND KDFEKLVMDL QPLIIRRIKT FGFNHYDLED LYQEILIRMY RSVQTFDFSG EQPFTNYVQC LITSVKYDYL RKYLATNKRM DNLINEYRVT YPCAIKRFDV ENNYLNKLAI KELICQFKYL SAFEKDVMYL MCEQYKPREI AQLMHVKEKV IYNAIQRCKN KIKRYFKMI
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