Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_0568 |
Symbol | |
ID | 5317815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 613359 |
End bp | 614105 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640778655 |
Product | RNA methyltransferase |
Protein accession | YP_001315713 |
Protein GI | 150393038 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.927994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAAGATA CGGTTATTGT TGGTAGGCAT GCTGTTAGAG AAGCGATTAT TACTGGGCAT CCGATAAATA AGATATTGAT TCAAGAAGGT ATTAAAAAGC AACAAATTAA TGAAATTTTA AAAAATGCAA AAGATCAAAA AATTATTGTT CAAACTGTAC CAAAATCTAA ATTAGATTTT TTAGCAAATG CACCACATCA GGGTGTTGCA GCGCTTATTG CACCATATGA ATATGCTGAC TTCGATCAAT TTTTAAAACA GCAAAAAGAA AAAGAAGGTT TATCGACAGT ACTTATATTA GACGGCTTAG AAGACCCGCA TAACTTGGGA TCAATTTTAA GAACAGCCGA TGCAACGGGA GTTGATGGTG TTATTATTCC TAAACGTCGT TCAGTTACAC TAACGCAAAC AGTTGCAAAA GCCTCAACAG GTGCAATTGA ACATGTACCA GTTATTCGAG TGACAAATTT AGCTAAAACT ATCGATGAAC TAAAAGATAA TGGCTTTTGG GTAGCTGGCA CTGAAGCTAA TAATGCAACA GATTATAGAA ATCTAGAAGC GGACATGTCA TTGGCTATTG TAATTGGTAG CGAAGGACAG GGTATGAGTC GCCTAGTAAG TGATAAATGC GATTTTTATA TTAAGATTCC AATGGTTGGA CATGTAAACA GTTTGAATGC TTCGGTTGCA GCAAGTTTAA TGATGTACGA AGTATTTCGA AAAAGACATG ATGTTGGAGA AATATAA
|
Protein sequence | MEDTVIVGRH AVREAIITGH PINKILIQEG IKKQQINEIL KNAKDQKIIV QTVPKSKLDF LANAPHQGVA ALIAPYEYAD FDQFLKQQKE KEGLSTVLIL DGLEDPHNLG SILRTADATG VDGVIIPKRR SVTLTQTVAK ASTGAIEHVP VIRVTNLAKT IDELKDNGFW VAGTEANNAT DYRNLEADMS LAIVIGSEGQ GMSRLVSDKC DFYIKIPMVG HVNSLNASVA ASLMMYEVFR KRHDVGEI
|
| |