| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_0529 |
|---|
| Symbol | ipk |
|---|
| ID | 5317223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 559467 |
|---|
| End bp | 560315 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640778600 |
|---|
| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_001315674 |
|---|
| Protein GI | 150392999 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0171348 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATATG AAACGGCACC AGCCAAAATT AATTTTACGC TCGATACACT TTTTAAAAGA
AATGATGGCT ATCATGAGAT TGAAATGATA ATGACAACAG TTGATTTAAA TGATCGTTTA
ACTTTTCATA AAAGAAAAGA TCGAAAGATA GTTGTTGAGA TTGAACATAA TTATGTGCCT
TCTAATCATA AAAATCTCGC ATATCGTGCA GCGCAACTAT TTATTGAGCA ATATCAACTA
AAGCAAGGTG TAACAATTTC TATCGATAAA GAAATACCTG TTTCTGCTGG CTTAGCTGGA
GGTTCGGCTG ATGCAGCAGC AACGTTAAGA GGATTGAATC GACTTTTTGA TATAGGGGCG
AGTTTGGAAG AATTGGCTCT ACTAGGCAGT AAAATTGGGA CAGATATTCC GTTTTGTATT
TATAATAAAA CTGCACTATG TACTGGAAGA GGAGAGAAAA TCGAGTTTTT AAATAAACCA
CCTTCAGCTT GGGTGATTCT TGCTAAACCA AACTTAGGCA TATCATCACC AGATATATTT
AAGTTGATCA ATTTAGATAA GCGTTACGAC GTACATACGA AAATGTGTTA TGAGGCCTTA
GAAAATCGAG ATTATCAACA ATTATGTCAA AGTTTGTCTA ATCGATTAGA GCCAATTTCT
GTTTCAAAAC ACCCACAAAT CGATAAATTA AAAAATAATA TGTTGAAAAG TGGTGCAGAT
GGTGCGTTAA TGAGTGGAAG CGGACCGACT GTGTATGGGC TAGCACGAAA AGAAAGCCAA
GCAAAAAATA TTTATAATGC AGTTAACGGT TGTTGTAATG AAGTGTACTT AGTTAGACTA
TTAGGATAG
|
|---|
| Protein sequence | MIYETAPAKI NFTLDTLFKR NDGYHEIEMI MTTVDLNDRL TFHKRKDRKI VVEIEHNYVP
SNHKNLAYRA AQLFIEQYQL KQGVTISIDK EIPVSAGLAG GSADAAATLR GLNRLFDIGA
SLEELALLGS KIGTDIPFCI YNKTALCTGR GEKIEFLNKP PSAWVILAKP NLGISSPDIF
KLINLDKRYD VHTKMCYEAL ENRDYQQLCQ SLSNRLEPIS VSKHPQIDKL KNNMLKSGAD
GALMSGSGPT VYGLARKESQ AKNIYNAVNG CCNEVYLVRL LG
|
|---|
| |