| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_0439 |
|---|
| Symbol | |
|---|
| ID | 5317403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | - |
|---|
| Start bp | 457861 |
|---|
| End bp | 459384 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640778508 |
|---|
| Product | alkyl hydroperoxide reductase subunit F |
|---|
| Protein accession | YP_001315587 |
|---|
| Protein GI | 150392912 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
|---|
| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00965821 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAATG CTGATTTAAA ACAACAACTT AAACAATTAT TAGAACTAAT GGAGGGCAAC
GTTGAATTCG TTGCCAGCCT TGGTTCAGAT GAAAAATCTA AGGAACTCAA AGAATTATTA
ACAGAAATTT CTGATATGTC ACCTAGACTT TCACTTTCTG AAAAGTCTTT AAAACGTACA
CCAAGTTTCT CAGTCAACCG TCCTGGCGAA GAAACAGGTG TAACATTTGC AGGAATTCCA
TTAGGTCACG AGTTTAACTC ACTTGTTTTA GCAATTTTAC AGGTTAGTGG TCGTGCACCT
AAAGAAAAAC AGTCAATTAT TGACCAAATT AAAAACTTAG AAGGTTCATT CCATTTTGAA
ACATTCATTA GTTTAACGTG TCAAAAATGT CCTGATGTCG TTCAAGCACT TAACTTAATG
AGTGTGATCA ACCCTAACAT CACGCATTCT ATGATTGATG GTGCAGTGTT CCGTGAAGAA
TCTGAAAACA TCATGGCAGT CCCTGCTGTC TTTTTAAACG GCGAAGAATT TGGCAATGGT
CGTATGACAA TCCAAGATAT TCTTTCGAAA CTAGGCAGTA CGGCAGATGC ATCTGAGTTT
GAAAATAAAG AACCTTATGA TGTCTTAATC GTTGGTGGTG GTCCTGCTAG TGGTAGTGCA
GCGATTTACA CAGCACGTAA AGGTTTACGT ACTGGTATAG TTGCTGATCG TATCGGTGGC
CAAGTTAATG ATACTGCTGG TATTGAGAAC TTCATTACTG TTAAAGAAAC AACTGGTTCT
GAATTTTCTT CTAACTTAGC AGCGCACATT GATCAATATG ACATTGATGC AATGACAGGT
ATACGTGCTA CAGATATCGA AAAGACTGAC GAAGCAATTA AAGTTACGTT AGAAAACGGT
GCTGTCTTAG AAAGTAAAAC AGTCATTATT GCTACTGGTG CAGGTTGGCG TAAGCTAAAC
ATTCCAGGTG AAGAGCAATT GATTAATAAA GGTGTTGCAT TCTGCCCTCA CTGTGACGGA
CCTCTATTCG AAAATAAAGA CGTAGCAGTT ATCGGTGGCG GTAACTCTGG GGTTGAAGCA
GCAATTGACC TTGCTGGTAT CGTTAATCAT GTTACATTAT TCGAATTCGC TAGCGAATTA
AAAGCAGACA ACGTGTTACA AGATCGTTTA CGTTCTTTAT CAAATGTTGA TATCAAAACA
AATGCCAAAA CTACTGAAGT TGTCGGAGAA GACCATGTTA CAGGTATACG TTACGAAGAC
ATGAGCACCG GCGAAGAACA TCTACTTAAC TTAGATGGTA TCTTTGTTCA AATTGGTTTA
CTTCCAAACA CATCATGGTT AAAAGATGCT GTTGAATTAA ACGAACGTGG TGAAATTGTT
ATTGATCGTA ACAATAATAC TAACGTACCT GGAATATTTG CTGCTGGCGA TGTCACAGAT
CAGAAGAACA AACAAATTAT CATTTCAATG GGCGCTGGTG CAAATGCAGC ATTAAATGCC
TTTGACTATA TTATCAGAAA CTAA
|
|---|
| Protein sequence | MLNADLKQQL KQLLELMEGN VEFVASLGSD EKSKELKELL TEISDMSPRL SLSEKSLKRT
PSFSVNRPGE ETGVTFAGIP LGHEFNSLVL AILQVSGRAP KEKQSIIDQI KNLEGSFHFE
TFISLTCQKC PDVVQALNLM SVINPNITHS MIDGAVFREE SENIMAVPAV FLNGEEFGNG
RMTIQDILSK LGSTADASEF ENKEPYDVLI VGGGPASGSA AIYTARKGLR TGIVADRIGG
QVNDTAGIEN FITVKETTGS EFSSNLAAHI DQYDIDAMTG IRATDIEKTD EAIKVTLENG
AVLESKTVII ATGAGWRKLN IPGEEQLINK GVAFCPHCDG PLFENKDVAV IGGGNSGVEA
AIDLAGIVNH VTLFEFASEL KADNVLQDRL RSLSNVDIKT NAKTTEVVGE DHVTGIRYED
MSTGEEHLLN LDGIFVQIGL LPNTSWLKDA VELNERGEIV IDRNNNTNVP GIFAAGDVTD
QKNKQIIISM GAGANAALNA FDYIIRN
|
|---|
| |