Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_0238 |
Symbol | |
ID | 5317194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 282696 |
End bp | 283955 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640778308 |
Product | PTS system, galactitol-specific IIC subunit |
Protein accession | YP_001315387 |
Protein GI | 150392712 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
TIGRFAM ID | [TIGR00827] PTS system, galactitol-specific IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTACT TCACTGATTT TGTAAGGGGA TTTTTAGATT TAGGTGCAAC TGTTATTTTA CCGGTTGTCA TATTCTTGCT TGGCCTATTC TTTAGGCAGA AAATTGGAGC GGCATTTAGG TCTGGTTTAA CAATAGGTGT GGCTTTTGTA GGGATTTTCT TAGTCATCGA TTTATTAGTT AAAAATTTAG GGCCAGCAGC ACAAGCGATG GTTAAAAATT TAGGCGTCAG TCTGAATGTG ATTGATGTAG GTTGGCCAGC AACATCATCT ATCGCTTGGG CATCATCTGT CGCAGCATTT ATTATTCCAC TCGGAATCAT AGTTAACGTT GTATTGCTAG TAACTAAAGT GACAAAGACG ATGAATGTAG ATATTTGGAA TTTTTGGCAT TATACGTTTA CAGCAGCAAT GGTTTATGCC GTATCAGGCA GTATTTGGCA AGCGTTATTA GCAGCAGTTA TTTTCCAAGT TATCTGTTTG AAAGTAGCAG ATTGGACAGC ACCGATGATG AGTGAGTTCT TTGATTTACC AGGTGTATCG ATTGCGACAG GAAGCACGAT TTCTTATGCA CCAGGTATTT ACTTAGTTAA ATTGTTACAA AAAGTACCCG GTCTGAATAA GTTAGATGCT GATCCTGAAA CAATTCAAAA ACGTTTTGGC GCATTTGGAG AGTCTATATT TGTCGGCTTA ATTTTAGGTT TAGGTATTGG TGTGTTAGCA GGTTACAAAC CTGGAGACAT CATTAATTTA GGAATGTCAA TGGCTGCAGT AATGGTATTA ATGCCTAGAA TGGTAAAAAT CTTAATGGAA GGTTTAATGC CAGTTTCAGA GTCTGCAAGA ACATGGCTAA ATAAACGTTT TGGCGAACGT GAAATTTATA TTGGATTGGA TGCGGCTGTA GCATTAGGTC ATCCAGCGGT TATTTCGACA GCATTAATTT TAGTACCTAT CACTGTTTTA TTAGCCGTTA TTTTACCAGG AAACCAAGTA CTACCTTTTG GTGACTTAGC AACTATACCA TTTGTTGTCG CGTTTATTGT TGGTGCAGCA AGAGGAAACA TTATTCATTC TGTCATTGTG GGTACGATTA TGATTGCAAT TTCATTATAT ATTGCAACAG ACGTAGCACC CATTTTCACA GATATGGCGA AAGGTACGAA TGTACAAATG CCAAAAGGTT CATCTGAAAT TTCAAGTATT GATCAAGGTG GTAATATCGT TAACTATCTT ATCTTTAAAC TATTTAGTCT ATTCAATTAA
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Protein sequence | MSYFTDFVRG FLDLGATVIL PVVIFLLGLF FRQKIGAAFR SGLTIGVAFV GIFLVIDLLV KNLGPAAQAM VKNLGVSLNV IDVGWPATSS IAWASSVAAF IIPLGIIVNV VLLVTKVTKT MNVDIWNFWH YTFTAAMVYA VSGSIWQALL AAVIFQVICL KVADWTAPMM SEFFDLPGVS IATGSTISYA PGIYLVKLLQ KVPGLNKLDA DPETIQKRFG AFGESIFVGL ILGLGIGVLA GYKPGDIINL GMSMAAVMVL MPRMVKILME GLMPVSESAR TWLNKRFGER EIYIGLDAAV ALGHPAVIST ALILVPITVL LAVILPGNQV LPFGDLATIP FVVAFIVGAA RGNIIHSVIV GTIMIAISLY IATDVAPIFT DMAKGTNVQM PKGSSEISSI DQGGNIVNYL IFKLFSLFN
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