| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_0143 |
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| Symbol | |
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| ID | 5315238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009632 |
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| Strand | + |
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| Start bp | 163466 |
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| End bp | 165301 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640778213 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001315292 |
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| Protein GI | 150392617 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGGTT TTATGGCACA TTTATCTGTG AAATTGCGGC TTTTAATACT AGCATTAATC
GATTCACTGA TAGTGACATT TTCAGTATTC GTAAGTTATT ACATTTTAGA ACCGTATTTC
AAAACATATT CTGTCAAATT ATTAATATTG GCAGCTATAT CACTATTCAT ATCGCATCAT
ATTTCAGCAT TTATTTTTAA TATGTATCAT CGAGCGTGGG AATATGCCAG TGTGAGTGAA
TTGATTTTAA TTGTTAAAGC TGTGACGACA TCTATCGTTA TTACGATGGT GGTCGTGACA
ATTGTTACAG GCAATAGACC GTTTTTTAGA TTGTATTTAA TTACTTGGAT GATGCACTTG
ATTTTAATAG GTGGCTCAAG GTTATTTTGG CGTATTTATC GGAAATACCT TGGAGGTAAG
TCATTTAATA AGAAGCCAAC TTTAGTTGTT GGTGCTGGTC AAGCAGGTTC AATGCTGATT
AGACAAATGT TGAAAAGTGA CGAAATGAAA CTTGAACCGG TATTAGCAGT CGATGATGAC
GAACATAAAC GCAATATCAC AATTACTGAG GGTGTAAAAG TCCAAGGTAA AATTGCGGAT
ATTCCAGAAC TAGTGAGGAA ATATAAGATT AAAAAAATCA TCATTGCAAT TCCAACTATT
GGTCAAGAGC GTTTGAAAGA AATTAATAAT ATTTGCCATA TGGATGGCGT TGAGTTATTG
AAAATGCCAA ATATAGAAGA CGTCATGTCT GGTGAGTTAG AAGTGAATCA ACTGAAAAAA
GTTGAAGTAG AAGATTTACT AGGCAGAGAT CCTGTTGAAT TAGATATGGA TATGATATCA
AATGAATTGA CGAATAAAAC TATTTTAGTT ACGGGTGCAG GTGGTTCAAT AGGATCAGAA
ATTTGTAGAC AAGTTTGTAA TTTCTATCCA GAACGTATTA TTCTACTTGG CCATGGTGAA
AACAGTATTT ATTTAATCAA TCGTGAATTG CGAAATCGCT TCGGAAAAAA TGTTGATATC
GTTCCTATTA TAGCGGATGT GCAAAATAGA GCGCGTATGT TTGAAATTAT GGAAACGTAT
AAACCATACG CAGTTTATCA TGCAGCAGCA CACAAGCACG TGCCGTTAAT GGAAGACAAC
CCTGAAGAAG CAGTACATAA TAATATTTTA GGTACGAAAA ATACTGCTGA AGCTGCTAAA
AATGCAGAGG TAAAGAAATT CGTTATGATT TCTACGGATA AAGCCGTTAA TCCGCCTAAT
GTCATGGGAG CTTCAAAGCG AATTGCAGAA ATGATTATTC AAAGTTTAAA TGATGAAACG
CATCGAACAA ATTTTGTTGC AGTGAGATTT GGTAATGTAC TTGGATCGAG AGGATCTGTG
ATTCCACTTT TCAAAAGTCA AATTGAAGAA GGTGGGCCAG TTACTGTGAC ACATCCTGAA
ATGACACGTT ACTTTATGAC AATTCCTGAA GCTTCTAGAC TAGTTTTGCA GGCAGGGGCA
TTAGCAGAAG GTGGCGAAGT ATTTGTGCTA GATATGGGAG AACCAGTGAA AATTGTAGAT
TTGGCACGTA ATTTAATTAA GCTAAGTGGT AAAAAAGAAG ACGACATACG CATTACTTAT
ACAGGGATTA GACCCGGCGA AAAAATGTTT GAAGAGCTTA TGAATAAAGA TGAGGTTCAT
CCTGAACAAG TATTTGAAAA AATTTATCGT GGCAAAGTAC AACATATGAA ATGTAATGAA
GTTGAAGCGA TTATTCAAGA CATCGTCAAT GACTTTAGTA AAGAAAAAAT TATTAACTAT
GCCAATGGCA AAAAGGGAGA TAATTATGTT CGATGA
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| Protein sequence | MRGFMAHLSV KLRLLILALI DSLIVTFSVF VSYYILEPYF KTYSVKLLIL AAISLFISHH
ISAFIFNMYH RAWEYASVSE LILIVKAVTT SIVITMVVVT IVTGNRPFFR LYLITWMMHL
ILIGGSRLFW RIYRKYLGGK SFNKKPTLVV GAGQAGSMLI RQMLKSDEMK LEPVLAVDDD
EHKRNITITE GVKVQGKIAD IPELVRKYKI KKIIIAIPTI GQERLKEINN ICHMDGVELL
KMPNIEDVMS GELEVNQLKK VEVEDLLGRD PVELDMDMIS NELTNKTILV TGAGGSIGSE
ICRQVCNFYP ERIILLGHGE NSIYLINREL RNRFGKNVDI VPIIADVQNR ARMFEIMETY
KPYAVYHAAA HKHVPLMEDN PEEAVHNNIL GTKNTAEAAK NAEVKKFVMI STDKAVNPPN
VMGASKRIAE MIIQSLNDET HRTNFVAVRF GNVLGSRGSV IPLFKSQIEE GGPVTVTHPE
MTRYFMTIPE ASRLVLQAGA LAEGGEVFVL DMGEPVKIVD LARNLIKLSG KKEDDIRITY
TGIRPGEKMF EELMNKDEVH PEQVFEKIYR GKVQHMKCNE VEAIIQDIVN DFSKEKIINY
ANGKKGDNYV R
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