| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_0023 |
|---|
| Symbol | |
|---|
| ID | 5315673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 31130 |
|---|
| End bp | 33448 |
|---|
| Gene Length | 2319 bp |
|---|
| Protein Length | 772 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640778099 |
|---|
| Product | cell wall anchor domain-containing protein |
|---|
| Protein accession | YP_001315178 |
|---|
| Protein GI | 150392503 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0275377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTT TATTACTTAA AACAAGTGTA TGGCTCGTTT TGCTTTTTAG TGTGATGGGA
TTATGGCAAG TCTCGAACGC GGCTGAGCAG TATACACCAA TCAAAGCACA TGTAGTAACA
ACGATAGACA AAGCAACAAC AGATAAGCAA CAAGTAACGC CAACAAAGGA AGCGGCTCAT
CAATTTGGTG AAGAAGCGGC AACCAACGTA TCAGCATCAG CACAGGGAAC AGCTGATGAA
ATAAACAATA AAGTAACATC CAACGCATTT TCTAACAAAC CATCTACAGC AGTTTCAACA
AAAGTAAACG AAACGCACGA TGTAGATACA CAACAAGCCT CAACACAAAA ACCAACTCAA
TCAGCAACAT TCACATTATC AAATGCTAAA ACAGCATCAC TTTCACCACG AATGTTTGCT
GCCAATGTAC CACAAACAAC AACACATAAA ATATTACATA CAAATGATAT CCATGGCCGA
CTAGCCGAAG AAAAAGGGCG TGTCATCGGT ATGGCTAAAT TAAAAACAAT AAAAGAACAA
GAAAAGCCTG ATTTAATGTT AGACGCAGGA GACGCCTTCC AAGGTTTACC ACTTTCAAAC
CAGTCTAAAG GTGAAGAAAT GGCTAAAGCA ATGAATGCAG TAGGTTATGA TGCTATGGCA
GTGGGTAACC ATGAATTTGA CTTTGGATAC GATCAGTTGA AAAAGTTAGA GGGTATGTTA
GACTTCCCGA TGCTAAGTAC TAACGTTTAC AAAGATGGGA AACGCGCGTT TAAGCCTTCA
ACAATTGTAA CGAAAAATGG TATTCGTTAT GGAATTATTG GCGTAACGAC ACCAGAAACA
AAGACGAAAA CAAGACCTGA GGGCATTAAA GGTGTTGAAT TTAGAGATCC ATTACAAAGT
GTGACAGCAG AAATGATGCG TATTTATAAA GACGTAGATA CATTTGTTGT TATATCACAT
TTAGGGATTG ATCCTTCAAC ACAAGAAACA TGGCGTGGTG ATTACTTAGT GAAACAATTA
AGTCAAAATC CACAATTGAA GAAACGTATT ACAGTCATTG ATGGTCATTC ACATACCGTA
CTTCAAAATG GTCAAATTTA TAACAATGAT GCATTAGCAC AAACAGGTAC AGCACTTGCG
AATATCGGTA AGGTTACATT TAATTACCGC AATGGAGAGG TATCAAATAT TAAACCGTCA
TTGATTAATG TTAAAGACGT TGAAAATGTA ACACCGAACA AAGCATTAGC TGAACAAATT
AATCAAGCTG ATCAAACATT TAGAGCACAA ACAGCAGAGG TTATTATTCC AAATAATACC
ATTGATTTCA AAGGAGAAAG AGATGACGTT AGAACGCGTG AAACAAATTT AGGAAACGCG
ATTGCAGATG CTATGGAAGC GTATGGCGTT AAGAATTTCT CTAAAAAGAC TGACTTTGCC
GTGACAAATG GTGGAGGTAT TCGTGCCTCT ATCGCAAAAG GTAAGGTGAC ACGCTATGAT
TTAATCTCAG TATTACCATT TGGAAATACG ATTGCGCAAA TTGATGTAAA AGGTTCAGAC
GTCTGGACAG CTTTCGAACA TAGTTTAGGT GCACCAACAA CACAAAAAGA CGGTAAGACA
GTATTAACAG CGAATGGCGG TTTACTACAT ATCTCTGATT CAATTCGTGT TTACTATGAT
ATGAATAAAC CGTCTGGCAA ACGAATTAAC GCTATTCAAA TTTTAAATAA AGAGACAGGT
AAGTTTGAAA ATATTGATTT AAAACGTGTA TATCATGTAA CGATGAATGA CTTCACAGCA
TCAGGTGGCG ACGGATATAG TATGTTCGGT GGCCCTAGAG AAGAAGGTAT TTCATTAGAT
CAAGTACTAG CAAGTTATTT AAAAACAGCT AACATAGCTA AGTATGATAC GACAGAACCA
CAACGTATGT TATTAGGTAA ACCAGCAGTA AGTGAACAAC CAGCTAAAGG ACAACAAGGT
AGCAAAGGTA GTGAGTCTGG TAAAGATGTA CAACCAATTG GTGACGACAA AGCGATGAAT
CCAGCGAAAC AACCAGCGAC AGGTAAAGTT GTATTGTTAC CAACGCATAG AGGAACTGTT
AGTAGCGGTA CAGAAGGTTC TGGTCGCACA TTAGAAGGAG CTACTGTATC AAGCAAGAGT
GGGAACCAAT TGGTTAGAAT GTCAGTGCCT AAAGGTAGCG CGCATGAGAA ACAGTTACCA
AAAACTGGAA CTAATCAAAG CTCAAGCCCA GCAGCGATGT TTGTATTAGT AGCAGGTATA
GGTTTAATCG CGACTGTACG ACGTAGAAAA GCTAGTTAA
|
|---|
| Protein sequence | MKALLLKTSV WLVLLFSVMG LWQVSNAAEQ YTPIKAHVVT TIDKATTDKQ QVTPTKEAAH
QFGEEAATNV SASAQGTADE INNKVTSNAF SNKPSTAVST KVNETHDVDT QQASTQKPTQ
SATFTLSNAK TASLSPRMFA ANVPQTTTHK ILHTNDIHGR LAEEKGRVIG MAKLKTIKEQ
EKPDLMLDAG DAFQGLPLSN QSKGEEMAKA MNAVGYDAMA VGNHEFDFGY DQLKKLEGML
DFPMLSTNVY KDGKRAFKPS TIVTKNGIRY GIIGVTTPET KTKTRPEGIK GVEFRDPLQS
VTAEMMRIYK DVDTFVVISH LGIDPSTQET WRGDYLVKQL SQNPQLKKRI TVIDGHSHTV
LQNGQIYNND ALAQTGTALA NIGKVTFNYR NGEVSNIKPS LINVKDVENV TPNKALAEQI
NQADQTFRAQ TAEVIIPNNT IDFKGERDDV RTRETNLGNA IADAMEAYGV KNFSKKTDFA
VTNGGGIRAS IAKGKVTRYD LISVLPFGNT IAQIDVKGSD VWTAFEHSLG APTTQKDGKT
VLTANGGLLH ISDSIRVYYD MNKPSGKRIN AIQILNKETG KFENIDLKRV YHVTMNDFTA
SGGDGYSMFG GPREEGISLD QVLASYLKTA NIAKYDTTEP QRMLLGKPAV SEQPAKGQQG
SKGSESGKDV QPIGDDKAMN PAKQPATGKV VLLPTHRGTV SSGTEGSGRT LEGATVSSKS
GNQLVRMSVP KGSAHEKQLP KTGTNQSSSP AAMFVLVAGI GLIATVRRRK AS
|
|---|
| |