Gene SaurJH1_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_0002 
Symbol 
ID5316576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp2280 
End bp3413 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content33% 
IMG OID640778076 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001315157 
Protein GI150392482 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0177596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAAT TCACTATTAA AAGAGATTAT TTTATTACAC AATTAAATGA CACATTAAAA 
GCTATTTCAC CAAGAACAAC ATTACCTATA TTAACTGGTA TCAAAATCGA TGCGAAAGAA
CATGAAGTTA TACTAACTGG TTCAGACTCT GAAATTTCAA TAGAAATCAC TATTCCTAAA
ACTGTAGATG GCGAAGATAT TGTCAATATT TCAGAAACAG GCTCAGTAGT ACTTCCTGGA
CGATTCTTTG TTGATATTAT AAAAAAATTA CCTGGTAAAG ATGTTAAATT ATCTACAAAT
GAACAATTCC AGACATTAAT TACATCAGGT CATTCTGAAT TTAATTTAAG TGGCTTAGAT
CCAGATCAAT ATCCTTTATT ACCTCAAGTT TCTAGAGATG ACGCAATTCA ATTGTCGGTA
AAAGTGCTTA AAAACGTGAT TGCACAAACG AATTTTGCAG TGTCCACCTC AGAAACACGC
CCAGTACTAA CTGGTGTGAA CTGGCTTATA CAAGAAAATG AATTAATATG CACAGCGACT
GACTCACACC GCTTGGCTGT AAGAAAGTTG CAGTTAGAAG ATGTTTCTGA AAACAAAAAT
GTCATCATTC CAGGTAAGGC TTTAGCTGAA TTAAATAAAA TTATGTCTGA CAATGAAGAA
GACATTGATA TCTTCTTTGC TTCAAACCAA GTTTTATTTA AAGTTGGAAA TGTGAACTTT
ATTTCTCGAT TATTAGAAGG ACATTATCCT GATACAACAC GTTTATTCCC TGAAAACTAT
GAAATTAAAT TAAGTATAGA CAATGGGGAG TTTTATCATG CGATTGATCG TGCCTCTTTA
TTAGCACGTG AAGGTGGTAA TAACGTTATT AAATTAAGTA CAGGTGATGA CGTTGTTGAA
TTATCTTCTA CATCACCAGA AATTGGTACT GTAAAAGAAG AAGTTGATGC AAACGATGTT
GAAGGTGGTA GCCTGAAAAT TTCATTCAAC TCTAAATATA TGATGGATGC TTTAAAAGCA
ATCGATAATG ATGAGGTTGA AGTTGAATTC TTCGGTACAA TGAAACCATT TATTCTAAAA
CCAAAAGGTG ACGACTCGGT AACGCAATTA ATTTTACCAA TCAGAACTTA CTAA
 
Protein sequence
MMEFTIKRDY FITQLNDTLK AISPRTTLPI LTGIKIDAKE HEVILTGSDS EISIEITIPK 
TVDGEDIVNI SETGSVVLPG RFFVDIIKKL PGKDVKLSTN EQFQTLITSG HSEFNLSGLD
PDQYPLLPQV SRDDAIQLSV KVLKNVIAQT NFAVSTSETR PVLTGVNWLI QENELICTAT
DSHRLAVRKL QLEDVSENKN VIIPGKALAE LNKIMSDNEE DIDIFFASNQ VLFKVGNVNF
ISRLLEGHYP DTTRLFPENY EIKLSIDNGE FYHAIDRASL LAREGGNNVI KLSTGDDVVE
LSSTSPEIGT VKEEVDANDV EGGSLKISFN SKYMMDALKA IDNDEVEVEF FGTMKPFILK
PKGDDSVTQL ILPIRTY