Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6518 |
Symbol | |
ID | 5320821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009622 |
Strand | - |
Start bp | 207573 |
End bp | 208307 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640778067 |
Product | IstB ATP binding domain-containing protein |
Protein accession | YP_001314999 |
Protein GI | 150378405 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.621423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.105365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACGAT CCCAAATCCT CGACATGATG GGCACGCTGA AGCTCTTCGG CATGCGCAGC GCCTATGACG AGATCATGGC TTCCGGCATC AAGCGCCAGC ATGAGCCGCC CCGCATTGTC GGCGACCTGC TGCAGTCGGA GATCGCCGAG AAACAGGCCC GCTCGATCAA ATACCAGATC GCTGTCGCCA AGCTGCCGCT GGCCAAGGAC ATCGACGACT TCGACTTCAC CGACACGCCC GTCAATGAAG GGCTGGTGCG CCAGCTCGCG ACCGGAGCCT TCCTCGCCGA GCAGCACAAC ATTGTCCTGG TCGGCGGGAC CGGCACGGGA AAGTCTCACC TGTCCATCGC GCTTGCCCGT GCCCTGATCC GCAACGGAGC ACGAGGCCGG TTCTTCAACG TCGTCGATCT CGTCAACCGG CTCGAGACGG AAGCACGCAA TGGCAAGCAG GGGCGGCTTG CCGACTTCAT CACCAGGCTC GACTTCGTCA TCATGGACGA ACTTGGCTAT CTCCCGTTCG CTCAGGCCGG CGGCCAGCTC CTCTTCCATC TGATCAGCAG GCTCTACGAG CGCACCTCGA TCATCGTCAC GACGAACCTG GCGTTCGGCG AATGGCCCGC TGTCTTCGGA GACGCCAAAA TGACCGCCGC TCTGCTCGAC AGGCTCACCC ACCATTGCGA GATCATCGAG ACCGGAAATG AATCCTGGCG CTTCAAGAAC CGCTCTCAAA GCTAA
|
Protein sequence | MERSQILDMM GTLKLFGMRS AYDEIMASGI KRQHEPPRIV GDLLQSEIAE KQARSIKYQI AVAKLPLAKD IDDFDFTDTP VNEGLVRQLA TGAFLAEQHN IVLVGGTGTG KSHLSIALAR ALIRNGARGR FFNVVDLVNR LETEARNGKQ GRLADFITRL DFVIMDELGY LPFAQAGGQL LFHLISRLYE RTSIIVTTNL AFGEWPAVFG DAKMTAALLD RLTHHCEIIE TGNESWRFKN RSQS
|
| |