Gene Smed_6518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6518 
Symbol 
ID5320821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp207573 
End bp208307 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content61% 
IMG OID640778067 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001314999 
Protein GI150378405 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.621423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.105365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGAT CCCAAATCCT CGACATGATG GGCACGCTGA AGCTCTTCGG CATGCGCAGC 
GCCTATGACG AGATCATGGC TTCCGGCATC AAGCGCCAGC ATGAGCCGCC CCGCATTGTC
GGCGACCTGC TGCAGTCGGA GATCGCCGAG AAACAGGCCC GCTCGATCAA ATACCAGATC
GCTGTCGCCA AGCTGCCGCT GGCCAAGGAC ATCGACGACT TCGACTTCAC CGACACGCCC
GTCAATGAAG GGCTGGTGCG CCAGCTCGCG ACCGGAGCCT TCCTCGCCGA GCAGCACAAC
ATTGTCCTGG TCGGCGGGAC CGGCACGGGA AAGTCTCACC TGTCCATCGC GCTTGCCCGT
GCCCTGATCC GCAACGGAGC ACGAGGCCGG TTCTTCAACG TCGTCGATCT CGTCAACCGG
CTCGAGACGG AAGCACGCAA TGGCAAGCAG GGGCGGCTTG CCGACTTCAT CACCAGGCTC
GACTTCGTCA TCATGGACGA ACTTGGCTAT CTCCCGTTCG CTCAGGCCGG CGGCCAGCTC
CTCTTCCATC TGATCAGCAG GCTCTACGAG CGCACCTCGA TCATCGTCAC GACGAACCTG
GCGTTCGGCG AATGGCCCGC TGTCTTCGGA GACGCCAAAA TGACCGCCGC TCTGCTCGAC
AGGCTCACCC ACCATTGCGA GATCATCGAG ACCGGAAATG AATCCTGGCG CTTCAAGAAC
CGCTCTCAAA GCTAA
 
Protein sequence
MERSQILDMM GTLKLFGMRS AYDEIMASGI KRQHEPPRIV GDLLQSEIAE KQARSIKYQI 
AVAKLPLAKD IDDFDFTDTP VNEGLVRQLA TGAFLAEQHN IVLVGGTGTG KSHLSIALAR
ALIRNGARGR FFNVVDLVNR LETEARNGKQ GRLADFITRL DFVIMDELGY LPFAQAGGQL
LFHLISRLYE RTSIIVTTNL AFGEWPAVFG DAKMTAALLD RLTHHCEIIE TGNESWRFKN
RSQS