Gene Smed_6515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6515 
Symbol 
ID5320818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp205785 
End bp206840 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content61% 
IMG OID640778066 
Producthypothetical protein 
Protein accessionYP_001314998 
Protein GI150378404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0568004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG TCGCAGACAC GCTGGGCGTC TCCCGTTCCA ACCTTGTCGA GCGGTTGAAA 
GGCCGATCAA AGCCGCGCGG GTCCTATCGC AAGGCCGAGG ATGCGGAGCT TCTGCCCATC
ATTCGCAGGC TGGTGGATCA AAGGCCCACC TATGGCTATC GGCGGATCGC CGCGCTCCTC
AATCGCGAAA GGCGAGCCGC CGATCAGCCT GTCGTCAACG CCAAACGAGT TCATCGCATC
ATGGGCAACC ACGCAATGTT GCTGGAGAAG CATACGGCCG CTCGCAAGGG CCGCATCCAC
GACGGCAAGG TGATGGTCAT GCGCTCGAAC CTGCGCTGGT GCTCCGACGG TCTGGAGTTC
ACCTGCTGGA ATGGTGAGGT CATACGTCTC GCCTTCATCA TCGACGCCTT CGACCGCGAG
ATCATCGCCT GGACGGCGGT CGCCAATGCA GGCATCTCCG GCTCTGACGT GCGCGACATG
ATGCTGGAGG CGGTCGAGAA GCGGTTCACA GCGACCCGAG CCCCGCACGC CATCGAGCAT
CTCTCGGACA ATGGCTCGGC CTACACCGCG AGGGATACGA GGCTGTTTGC CCAGGCGCTC
AATCTGACGC CTTGCTTCAC GCCGGTGGCC AGTCCACCAG GACCGAGTTC TTTGCGCTCG
CGCGCTGCCT TTTCCGATAC CCGCGGACGG CGGCGCATAG TCTTTTCGGG CGTGCTTGCC
ACAGACGCGG CAGGCACTGC CACATCGACC TCATCGAGCG GCTTGGTGCT GTTTTCCGAC
GCGGCGATTA AAAGATCCTC CAGCGCCAGT TCCAACTGCT GGATTTCCCG TTCGATCTTT
TCCGAGGACT TGCCGAAGAC CTGTTTCTTC AGCTTGGCGA TGCGCAGTCG CAGTTCCCCG
ATCAATTGGT CGTGTACCTG CAACGTCGCC GACATCTTCG CGTTTTCCGC CTGCAGGGCG
GCGATCATCG CCTTCAGGAA GGCCGGATCG TCGGGAAGAT TTTGGCTCGC GTTCGACATG
AACCTGACTA CCATAGGTCA GGGCGAGTAT CCATAA
 
Protein sequence
MKAVADTLGV SRSNLVERLK GRSKPRGSYR KAEDAELLPI IRRLVDQRPT YGYRRIAALL 
NRERRAADQP VVNAKRVHRI MGNHAMLLEK HTAARKGRIH DGKVMVMRSN LRWCSDGLEF
TCWNGEVIRL AFIIDAFDRE IIAWTAVANA GISGSDVRDM MLEAVEKRFT ATRAPHAIEH
LSDNGSAYTA RDTRLFAQAL NLTPCFTPVA SPPGPSSLRS RAAFSDTRGR RRIVFSGVLA
TDAAGTATST SSSGLVLFSD AAIKRSSSAS SNCWISRSIF SEDLPKTCFF SLAMRSRSSP
INWSCTCNVA DIFAFSACRA AIIAFRKAGS SGRFWLAFDM NLTTIGQGEY P