Gene Smed_6512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6512 
Symbol 
ID5320815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp203403 
End bp203750 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content60% 
IMG OID640778063 
ProductIS66 Orf2 family protein 
Protein accessionYP_001314995 
Protein GI150378401 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0986817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGGC CTTCTGGAAA TGTGCGGGTC TATTTGGCTT GCGGGGTGAC CGACATGAGG 
CGTGGCATTG CTGGATTGTC GGCGTTGGTC GAAGCGGTCA TAAAGGAGGC GCCGGGGTCT
GGCGCGATCT TCGGGTTCCG CGGCAAACGC GCGGATCGGA TCAAGCTTCT CTGGTGGGAT
GGCCAGGGGT TTTGCCTGTT TTACAAGATT TTGGAGCGCG GGTACTTTCC TTGGCCGACG
GCGAAGGATG GTGTTGCCCA TCTGACGCAG GCCCAGCTTT CCATGCTCGT TGAGGGGATC
GATTGGCGCC GACCGGCGTG GACTTCCGCT CCTGGCCGAA TGGGATAA
 
Protein sequence
MIGPSGNVRV YLACGVTDMR RGIAGLSALV EAVIKEAPGS GAIFGFRGKR ADRIKLLWWD 
GQGFCLFYKI LERGYFPWPT AKDGVAHLTQ AQLSMLVEGI DWRRPAWTSA PGRMG