Gene Smed_6477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6477 
Symbol 
ID5320780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp174125 
End bp175213 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content59% 
IMG OID640778036 
Productferuloyl esterase 
Protein accessionYP_001314968 
Protein GI150378374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.803733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATG CGACTGGCCG ACCAACGCCC CCATTGGTTT TGAGCGAGGC GGAGCGGGAA 
TATCTGGAGC GACAGGTGCG CAAGCATCGT GTTGCACGCT CCCTGTCGGA GCGGTGCCGG
ATCATTCTTC GCTGTGGCGA GGGAGTTCCG AGCAAGGTCG TTGCGGACGA GCTCGGCGTG
CATGAACATA CGGTTGGCAA ATGGCGACGG CGCTTCCTCA AAGACCGACT CGATGGGCTG
CTCGACGAAG TTCGCCCTGG TCGGCCCCGA ACCATCGACG ACGATCAGAT CGCGGCTGTG
ATCGAGCGCA CGCTGCGTTC AACGCCAAGC GATGCGACCC ATTGGTCGAT CCGCTCGATG
GCAGGGGCCA CAGGCTTTTC GCACACGACC ATCCGCCGGA TATGGAACGC TTTCGGCCTG
CAGCCGCATC GCACAGAGAC GTTCAAGCTT TCCAGCGATC CTTTGTTCGT CGATAAGGTC
CGCGACATCG TCGGTCTTTA TCTGTCACCT CCCAATCGGG CGCTGGTTCT CAGCGTGGAC
GAGAAGAGCC AAATCCAGGC TCTCGACCGC GAGCAGCCAG TGTTGCCGAT GATGCCTGGC
GTGCCGGAAC GGCGCACGCA TTCCTATGTC CGACACGGCA CAACCACGTT GTTTGCCGCT
CTGGATGTCG CCTCCGGCTT TGTCATCGGC AAATGCTACA AGCGGCACCG TGCCACCGAA
TTCCTGGATT TCCTCAAGCA GATCGATGCG AGCGTACCGT CCGATTTGGA CGTTCATATC
GTGATGGACA ACTATGCGAC CCACAAAACT GCATCGGTCA AAAACTGGCT GATGCGACGG
CCGCGCTACC ACGTGCACTT CACCCCGACC TCGGCGTCAT GGATCAATCA GGTCGAACGC
TGGTTTGCGG AACTGACCCG CAAGCAGCTC CGTCGCGGCG TCCACACTTC GACAATGCAG
CTCGAAGCCG ACATCCGAAG CTTCATCGAA CGCCATAATC AGAACCCGAA GCCTTACAGG
TGGACGAAAT CCGCACACGA CATCCTGGCC TCCGTCAAAC GTTTCTGCCA GAAAGTCCAG
GACTTATGA
 
Protein sequence
MANATGRPTP PLVLSEAERE YLERQVRKHR VARSLSERCR IILRCGEGVP SKVVADELGV 
HEHTVGKWRR RFLKDRLDGL LDEVRPGRPR TIDDDQIAAV IERTLRSTPS DATHWSIRSM
AGATGFSHTT IRRIWNAFGL QPHRTETFKL SSDPLFVDKV RDIVGLYLSP PNRALVLSVD
EKSQIQALDR EQPVLPMMPG VPERRTHSYV RHGTTTLFAA LDVASGFVIG KCYKRHRATE
FLDFLKQIDA SVPSDLDVHI VMDNYATHKT ASVKNWLMRR PRYHVHFTPT SASWINQVER
WFAELTRKQL RRGVHTSTMQ LEADIRSFIE RHNQNPKPYR WTKSAHDILA SVKRFCQKVQ
DL