Gene Smed_6468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6468 
Symbol 
ID5320771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp114142 
End bp114942 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content59% 
IMG OID640778028 
Producthypothetical protein 
Protein accessionYP_001314960 
Protein GI150378366 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR03605] SagB-type dehydrogenase domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGG GGGGCGACAA CCGGCCTCTA TCACTTTTCG ATAAATACAC CCAATATCTC 
GATGCAGGCA GAATGGTGCT AAATTTGCCG CCGGTTTCCC TTTTCACCAT CAATGCCGAT
GCCCCCCGGG CCGTGTCGCT GCCGCCACCG CGCGACAATG GATGTTTCGG CCTAATGAAG
CGTCGGCGCA GCTATCGTGG CTTTGACGGG AGCGCCGCGG GATCGGTCAC CGAGGAACAG
TTGCGCTACT GTCGGTTCTC CCGCATCGGC ACCGTGGGAC TGGCGAGGGC CGATCTGGTG
GAGCTGCCGC TTAAGACGAC GCCGTCGGAG GGCACCAGAA ATCCCTATGA AGCCTATGTA
CTTGCCTGCA ATGGCCAGGA TCTTCCGAAC GGCCTCTATC ACTACTCGGC CCTGGAAAAT
TCGCTCGCTT ACATGCCTTG CGACACACTT CCCTCAGCAG AGACCGTTCT TGGTGGTCAG
GACTGGTTTT CCGGTGCGTC AGCCCTGATC CTACTGGTGG CAAATTTTGC GAGGACTGGA
TGGAAGTACC GGCATCCCGC CGGGTTCCGT GGGGTGTTGA TCGAGGCGGG GCACATTGCC
CAAAACATGT TGCTGGCGGC GACTGCCAAC GGCCTCGTTG CCACGCCCAC TTGCGCATTG
AACGATAGCG TCATCGAGAC CATGCTCGAT ATCGATCCGG TCATGCAATC GCCAATCTAT
GCGGTGGCGG TCGGCACCCA TTCGGCAACC GCAACAATAG CCGATCTGGT CGGCTGGTCA
GCCGTGGAAC ACCAGCAATG A
 
Protein sequence
MALGGDNRPL SLFDKYTQYL DAGRMVLNLP PVSLFTINAD APRAVSLPPP RDNGCFGLMK 
RRRSYRGFDG SAAGSVTEEQ LRYCRFSRIG TVGLARADLV ELPLKTTPSE GTRNPYEAYV
LACNGQDLPN GLYHYSALEN SLAYMPCDTL PSAETVLGGQ DWFSGASALI LLVANFARTG
WKYRHPAGFR GVLIEAGHIA QNMLLAATAN GLVATPTCAL NDSVIETMLD IDPVMQSPIY
AVAVGTHSAT ATIADLVGWS AVEHQQ