Gene Smed_6467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6467 
Symbol 
ID5320770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp113402 
End bp114145 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content59% 
IMG OID640778027 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_001314959 
Protein GI150378365 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGG TGGCCGACCT AGATCCATGG CAGGTGAGCA GTGTACTGCA GGTCCATATT 
TTTCTGAGCC AGCCGAGGGA AGCAAGCGTC AGATTGTGGA ATGCGGCGCG TGACGTTCTG
AACGAGGAGG AGCGTCAGCG CGCCCGACGC TTTGTCTTCG ACCGCGACCG CGACATGTAC
GTCTTCAGCC ATGGCCTGCT CAGGCTGTTG CTTGCCCGCT ATATGGTCGC TGATCCGCGT
GAACTGACTT TTGCTTCTGC ACCCGGGGGA CGGCCCGAAC TCGTCTCGCC GTCCTCTACT
CCGATCCGCT TCAACCTCTC TCATACCGAT GGATTGGTGG GCTGTATCCT CACGCAAAAA
GCCGATTGCG GCCTGGATGT CGAGCAGATC GGCAGGGTCG GCTACCGGCA TCTGGTCCCG
ACTGTGCTGG CTCCAGAGGA GCGTTCGGCG CTGCTGGGCC TGGCGGAAGC GGATCGGCCA
GATCGCTTTT GTGAGATCTG GACACTGAAG GAAGCTTATC TCAAGGGGCG AGGGCTGGGC
ATATCCTATC CCATCCGCAA TATCTCGTTT TCCGGTTTCG ACGGTAATCG CCGATGTCGC
GTCGTCGGTG ACGAACGAGA TGACGGCAGC ACATGGCACT TCTGGAGCAG GCCGTTTGCG
GGTGCATATT CTGCCGCGGC GGCTGTGCGA ACGCAGCGCG ACGACGTAAA ATTCTCCGCA
ACCTTTATCA AAGACCTGCC GTGA
 
Protein sequence
MSLVADLDPW QVSSVLQVHI FLSQPREASV RLWNAARDVL NEEERQRARR FVFDRDRDMY 
VFSHGLLRLL LARYMVADPR ELTFASAPGG RPELVSPSST PIRFNLSHTD GLVGCILTQK
ADCGLDVEQI GRVGYRHLVP TVLAPEERSA LLGLAEADRP DRFCEIWTLK EAYLKGRGLG
ISYPIRNISF SGFDGNRRCR VVGDERDDGS TWHFWSRPFA GAYSAAAAVR TQRDDVKFSA
TFIKDLP