Gene Smed_6460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6460 
Symbol 
ID5320763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp106307 
End bp106837 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID640778023 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001314955 
Protein GI150378361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.556682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGGCGG CGCCGGTGCG GGCGCGGCGC AAGCCGCGAG ACTGGCCGAA CGAGGAGAAG 
GAGCGCCTGA TTGCCGAGAC GTTGTTGCCT GGAGCCAATG TCTCTGCGAT CGCGCGCGCT
GAGGGATTGG ATCCCTCGCA GCTTTACGGG TGGCGTCGCA AGGCACTGTC ATCGGGGTTG
GTTGCGCCCC TGACGGAAAC CGCGAAGAAG GAGGTCAAGT TCGCGCGCGT TGAGCCGGTG
GCAAGCTCTG CGGTCAAAAT CGTCCTCGGT GATGTCGTGG TGCGCGTCGG CGGCGACATC
GAGTCGGATC ACCTGGCGAA GATACTCCGA GCGGCAAGGC ATGATCGCGT CCGGCGTTGT
CGTTTACGTG TCGTGCCAGC CGGTCGACTT CCAAAAAGGT GCGGCATCCT TAATGGCTCT
GGTCAGAGAT GGCGGTCTCG ACCCGTTCTT ATGCGTCGAG CGAGATTATG TGGCGGAGCC
CGTCTCGGCG CCAGCCGAGG CCCGCCAAAT CTGGAATTCT CCGCCACATA A
 
Protein sequence
MTAAPVRARR KPRDWPNEEK ERLIAETLLP GANVSAIARA EGLDPSQLYG WRRKALSSGL 
VAPLTETAKK EVKFARVEPV ASSAVKIVLG DVVVRVGGDI ESDHLAKILR AARHDRVRRC
RLRVVPAGRL PKRCGILNGS GQRWRSRPVL MRRARLCGGA RLGASRGPPN LEFSAT