| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6452 |
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| Symbol | |
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| ID | 5320755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | + |
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| Start bp | 100152 |
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| End bp | 101174 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640778019 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_001314951 |
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| Protein GI | 150378357 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.147811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.356209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA CGATCATGGG ATTGGACCTG GCCAAGAACG TGTTTCAGGC GCATGGCATC
GACGAGACAG GCAACACCGT GCTCGTGAAG CGGTTGCATC GGAAGCAGAT GCTGCCCTTC
TTCTCAAAGC TACCATCATG CCTGATCGGG ATGGAGGCGT GCGGAACAGC GCATCATTGG
GCTCGCACGC TCGCGGCGAT GGGGCACGAG GTCCGGCTCA TCCCGCCGTC CTATGTGAAG
GCCTATGTCA AGCGTGGCAA GAGCGACGCG CTGGATGCCG AAGCAATCTG CGAAGCCGTG
CAGCGCCCGA CGATGCGGTT CGTGCCTGTG AAGACGGTGG AGCAGCAGGG CATTCTCATG
ACCCACCGCG CGCGAGCGCT GCTCGTTCGC CAGCGCACCA TGGTCGCAAA TGCGCTGCGG
GCGCATTTGG CAGAATTCGG CCTTGTCGCC AATCCCGGCA TTGCCAATCT GGCCAAGCTG
GCGCAGCAAG CGCTGTCCGA TGAGGACGGC CTACCTTCTT ATGCACGCAC TTCGCTGGAT
ATTCTGATCC GGCAGATCAT GGTGTTTACC GATGAGATTG CGGTGCTGGA TCAGCAACTT
CACGCTTGGC ATGTCGACAG CGAAGCCAGT CGTAGGCTCG CAGCGATCCC CGGCCTCGGC
GTAGTCACGG CCACGGCTGT TGCTGCCACC GTCACCGATC CCGATCAATT CCGTTCAGGT
CGGCAATTTG CCGCTTGGCT CGGCCTGACG CCGCAACAGC ATTCGACAGG GGGCAAAACC
CAGCTCGGTG GCATCTCCAA GCAAGGAGAC CGATATTTGC GCCGATTGCT GGTTGTCGGT
GCTACCGCCG TCATCCGTCA CACGAAGGAC AAGGCAACAC CCATGGCGAA TTGGATCAGA
AAGCTCTTGG AGAAAAAGCC GTTCAGGCTC GTCTCCGTCG CGCTCGCCAA CAAGCTCGCG
CGGATCGCAT GGGTCGTACT GACCCGAAAG GAAGCTTATA GGGCTCATGA GCTGACGGCC
TGA
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| Protein sequence | MKITIMGLDL AKNVFQAHGI DETGNTVLVK RLHRKQMLPF FSKLPSCLIG MEACGTAHHW
ARTLAAMGHE VRLIPPSYVK AYVKRGKSDA LDAEAICEAV QRPTMRFVPV KTVEQQGILM
THRARALLVR QRTMVANALR AHLAEFGLVA NPGIANLAKL AQQALSDEDG LPSYARTSLD
ILIRQIMVFT DEIAVLDQQL HAWHVDSEAS RRLAAIPGLG VVTATAVAAT VTDPDQFRSG
RQFAAWLGLT PQQHSTGGKT QLGGISKQGD RYLRRLLVVG ATAVIRHTKD KATPMANWIR
KLLEKKPFRL VSVALANKLA RIAWVVLTRK EAYRAHELTA
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