Gene Smed_6450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6450 
Symbol 
ID5320753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp98635 
End bp98916 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content65% 
IMG OID640778017 
ProductCopG family transcriptional regulator 
Protein accessionYP_001314949 
Protein GI150378355 
COG category[K] Transcription 
COG ID[COG3905] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.158963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.302139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGAT GGGAGCCAAA CATGGAAACC AAGGTGCTGA CCGCGCACGT GCCACTGCCT 
CTCGCCGAGA AAGTCGATCA GATCGCCGCC CGCCTTGAGC GCTCGCGCGG GTGGATCGTC
AAGCAGGCGC TGACCGCCTG GATCGATCAG GAAGAGGAGC GCCGACGCTT GACGCTGGAA
GCGCTTGCCG ACGTCGACGC TGGCCGGGTG ATCGAGCACC ATGCCGTTCA GGCCTGGGCC
GACAGTCTTG ACAGCGACAA GCCGCTACCC TTGCCGCTGT GA
 
Protein sequence
MTRWEPNMET KVLTAHVPLP LAEKVDQIAA RLERSRGWIV KQALTAWIDQ EEERRRLTLE 
ALADVDAGRV IEHHAVQAWA DSLDSDKPLP LPL