| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6429 |
|---|
| Symbol | |
|---|
| ID | 5320732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009622 |
|---|
| Strand | - |
|---|
| Start bp | 84145 |
|---|
| End bp | 85755 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640778005 |
|---|
| Product | monophenol monooxygenase |
|---|
| Protein accession | YP_001314937 |
|---|
| Protein GI | 150378343 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCA CGCGATTTCT AACCGTTTCA CGCCGCTCTT TCGTCAAAGG CGCAACCGCT
GCCGCCGGTA CAGCCCTTTT CGCACCAAGC ATTCTGCGGG CGGCGACCAA GCATAGGCGC
AAGAACATGA CCAGCGCCGA TGGGCAGAAG GACTTGCAAA GTTATATGGA TGCCGTGACC
GCGATGCTGA AGCTTCCGCC TTCGGATCCG CGCAACTGGT ACCGCAATGG CTTCATCCAC
CTGATGGACT GCCCCCATGG CGACTGGTGG TTCACCAGCT GGCACCGCGG CTATCTTGGC
TATTTCGAAG AGACTTGCCG CGAACTGAGC GGCAATCCGG ATTTCGCCCT CCCATATTGG
GACTGGACGG CCAATCCCGA GGTTCTGCCG CCGCTGTTCG GCACGATTCT CGATCCCGTC
AACAGCTCCG CCTACATTCC CGACCACAAC CGCTTCCAGG ACATCATGCA GGAGCCGATC
AAGGCCTGTT GGGACAGTCT CAGCTCCGCC CAATTGCAGC AGCAGAACCT GCGCGGCTAT
CCGGATTTTG ATGCGCTATG GAGCGACGCA ATGGCGAGCT TCGCCAACCA GCCGAACGCC
CGCTTCCTGA CGGCGCAGAA TCCGAAACTC AATCCCGCCA CCCAAACCGC AGTCGACATC
GACACCATCA AGGCATCGCT GGCGCCAACA ACCTTCGCCA ACGACGCGGG CGCTCCGGGT
CTCGCTTTCA ACAGTCCGGT ATCGTCCAGC CACCAGGTGG CACCGGTCGG CTTCTCCATT
CTTGAAGGCC AGCCGCATAA CCGCGTCCAT ATGAGCGTCG GCGGCCAGAG CGCTCCCTAT
GGGCTGATGT CACAGAACCT GTCACCGCTC GACCCGATCT TCTTTCTGCA TCATTGCAAC
ATCGATCGGC TGTGGGATGT CTGGACCCGC AAGCAGCAGG CGATGGGCCT GCCCGTCGGG
CCAACGGCTG ACCAACAGAC GCAGTACGAT CCGGAACCCT ATCTCTTTTA TGTCAACGCT
GACGGTAGCC CGGTCAGCGA TAAGACCAGG GCCGCCGACT ATCTCGCAAT CGGCGCCTTT
GACTATGATT ATGAGCCCGG CAGCGGCGAC GAGGTGATCC CGGTTGCAAC CGCCGGCCGC
TCGGCCCCCA TTCCGGCATT GGAAGCAGCC GTGCCTGCGT CCGCGGCCGT GGCCATAAAC
AAACCGGCGA CTGCCAAGCT CACCGTTTCG CAGGAGCTCG TGGATGTTGC CGCGAAGCCT
TCGGAACAGT CGCGTCAATT CGCTAAGGTC AGCATCGCCC CGCCCATGGA CGTTGGCGGC
CTGAATTTCC TCGTTTTCAT TTCCCCCGAG GGAACGACGC CTGATCTCAA CCCGGACGGA
CCGGATTTCG CCGGCAGTTT CGAGTTCTTC GGTGTTCGTC ATCATCATAC CGACACGGTC
AGCTTCACCA TACCGATCGA CAAGGCGCTC GATAGGCTGA TCGACGATGG TAGGCTCAAA
GCGGGCGAAC CGATCGACTT CAACGTTGTG GTCGCGCAAG CGGGCAAACG TATCGAAGGC
AGCATGCCGG CGAAGGCACA GCTGACCGAC ATTCAGGTTG GGTCGTTCTG A
|
|---|
| Protein sequence | MTRTRFLTVS RRSFVKGATA AAGTALFAPS ILRAATKHRR KNMTSADGQK DLQSYMDAVT
AMLKLPPSDP RNWYRNGFIH LMDCPHGDWW FTSWHRGYLG YFEETCRELS GNPDFALPYW
DWTANPEVLP PLFGTILDPV NSSAYIPDHN RFQDIMQEPI KACWDSLSSA QLQQQNLRGY
PDFDALWSDA MASFANQPNA RFLTAQNPKL NPATQTAVDI DTIKASLAPT TFANDAGAPG
LAFNSPVSSS HQVAPVGFSI LEGQPHNRVH MSVGGQSAPY GLMSQNLSPL DPIFFLHHCN
IDRLWDVWTR KQQAMGLPVG PTADQQTQYD PEPYLFYVNA DGSPVSDKTR AADYLAIGAF
DYDYEPGSGD EVIPVATAGR SAPIPALEAA VPASAAVAIN KPATAKLTVS QELVDVAAKP
SEQSRQFAKV SIAPPMDVGG LNFLVFISPE GTTPDLNPDG PDFAGSFEFF GVRHHHTDTV
SFTIPIDKAL DRLIDDGRLK AGEPIDFNVV VAQAGKRIEG SMPAKAQLTD IQVGSF
|
|---|
| |