Gene Smed_6393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6393 
Symbol 
ID5320696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp53195 
End bp53803 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content62% 
IMG OID640777974 
Producthypothetical protein 
Protein accessionYP_001314906 
Protein GI150378312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.645123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTTATG ACAAGTGCCA GAAGGCGAAC CACAACGCCA CGCTGTTGAT CGTGCCGGAG 
GGGCCGCACG GGATGAACCG CCTTCCGACG CGCATGGCCA GCAGGATCAA CGATTTTGCT
CGGAAGCCAT CGAACCGGCC CGAGCTGGAG ATGACGTCCC GCGGTGATCC GGCTGCCGGT
GGTCACATGT TGCCGCGCGG TGGTGGACAG GCGCCGCGAG CTTTTAGCGC TTTCCCTCAC
TCGCCTCCGG ATGGGTGCCG TCGGAAACTG AGCCGGGATG GGGATCGACC ACGGCCTTGT
CCTCGCTCGG CTCCGGCTCT TTACGCGCGC CCTTTGCCGG AACGCTTCGC TCGGTTTGTG
TATCTTGTTT TCCACAAAGG CCTCCCCATT TCGATGCAGT CGGTTCAGAC AATGCTTCCC
CGACAAAAAC GTTCCACGAA GTCAAAATCT GGCGCGTGTT CGTTGAGGTA TCTCCGGCAC
CGCCATGCAG GGCGGCGGGC GTTTCAAACA GCATCGTGCT CGGCAGGGAA GCCGAAGTCC
GATGCCAACG CGCGGGACGG CTGCTTTGCC GCCAGGCTCG GACCCAAGGC AGGTTCGGCA
ATGCGATAG
 
Protein sequence
MIYDKCQKAN HNATLLIVPE GPHGMNRLPT RMASRINDFA RKPSNRPELE MTSRGDPAAG 
GHMLPRGGGQ APRAFSAFPH SPPDGCRRKL SRDGDRPRPC PRSAPALYAR PLPERFARFV
YLVFHKGLPI SMQSVQTMLP RQKRSTKSKS GACSLRYLRH RHAGRRAFQT ASCSAGKPKS
DANARDGCFA ARLGPKAGSA MR