Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6390 |
Symbol | |
ID | 5320693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009622 |
Strand | + |
Start bp | 51262 |
End bp | 52086 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640777972 |
Product | catalase |
Protein accession | YP_001314904 |
Protein GI | 150378310 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3546] Mn-containing catalase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTTA CGGACGGCAA ACTCCAGTAT CCGGTACGGG TCGAGACGCC CGACCCTTTG TTCGCTCGCG CGCTGCAGCA GGCGATTGGC GGCGTCGAAG GCGAGATTCG CGTCGCCATG CAGTATTTCT TCCAAGCCTG CGGAGCGCGC GGCAACACCA AGTTTCGCGA CCTCCTGATG AATACCGCAG CGGAGGAGCT TGGACATATC GAGATGCTGG CGACGGCAGT TGCCCTAAAC CTCGAGGGTG CACCCTTGAG CATTCGCGAG GAAGTTGCGG GCGATCCGGT CGGCGGTGCC GTCCTCGGCG GCATCAACCT CAAGAATCTG CTGTCCTCCG GCCTGGCGGC AATGCCGGTC GATTCGGACG GCGTGCCCTT CGACATGTCA CACATCTATG CCAGCGGCAA CATCGCGGCT GACATGACCG CCAATGTGAC TGCGGAAGCG ACCGGTCGCG TGCTGGCCGT TCGGCTCTAC GGCATGACCA ATGATCCAGG CATGAAGGAT ATGCTGTCCT TCTTGATTGC AAGGGATACG ATGCATCAGA ATCAATGGCT GGCGGCTCTT GAAGAGCTTG GCGGCCATGA GAAAGCCTTC CCCATCCCGA ACAGCTTCCC GCAAGACCAG GAACAACAAG AGTTCAGCTA TGCTTTTCTA GGCTTCCAGC AGGATGGCAG CGATCCCATT GCAGGCCGAT GGTCCCAAGG CCAGTCGATC GACGGCAAAG GCAGCTTTAA AGCCGGTCCG ACCATGGCGA TGGGACAGAA GCCCACACTC GCTCCGGCCA AGCCGAACAG CGGTGCGCAG TCGGAGCAGA TGTGA
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Protein sequence | MFFTDGKLQY PVRVETPDPL FARALQQAIG GVEGEIRVAM QYFFQACGAR GNTKFRDLLM NTAAEELGHI EMLATAVALN LEGAPLSIRE EVAGDPVGGA VLGGINLKNL LSSGLAAMPV DSDGVPFDMS HIYASGNIAA DMTANVTAEA TGRVLAVRLY GMTNDPGMKD MLSFLIARDT MHQNQWLAAL EELGGHEKAF PIPNSFPQDQ EQQEFSYAFL GFQQDGSDPI AGRWSQGQSI DGKGSFKAGP TMAMGQKPTL APAKPNSGAQ SEQM
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