Gene Smed_6390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6390 
Symbol 
ID5320693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp51262 
End bp52086 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content60% 
IMG OID640777972 
Productcatalase 
Protein accessionYP_001314904 
Protein GI150378310 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3546] Mn-containing catalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTTA CGGACGGCAA ACTCCAGTAT CCGGTACGGG TCGAGACGCC CGACCCTTTG 
TTCGCTCGCG CGCTGCAGCA GGCGATTGGC GGCGTCGAAG GCGAGATTCG CGTCGCCATG
CAGTATTTCT TCCAAGCCTG CGGAGCGCGC GGCAACACCA AGTTTCGCGA CCTCCTGATG
AATACCGCAG CGGAGGAGCT TGGACATATC GAGATGCTGG CGACGGCAGT TGCCCTAAAC
CTCGAGGGTG CACCCTTGAG CATTCGCGAG GAAGTTGCGG GCGATCCGGT CGGCGGTGCC
GTCCTCGGCG GCATCAACCT CAAGAATCTG CTGTCCTCCG GCCTGGCGGC AATGCCGGTC
GATTCGGACG GCGTGCCCTT CGACATGTCA CACATCTATG CCAGCGGCAA CATCGCGGCT
GACATGACCG CCAATGTGAC TGCGGAAGCG ACCGGTCGCG TGCTGGCCGT TCGGCTCTAC
GGCATGACCA ATGATCCAGG CATGAAGGAT ATGCTGTCCT TCTTGATTGC AAGGGATACG
ATGCATCAGA ATCAATGGCT GGCGGCTCTT GAAGAGCTTG GCGGCCATGA GAAAGCCTTC
CCCATCCCGA ACAGCTTCCC GCAAGACCAG GAACAACAAG AGTTCAGCTA TGCTTTTCTA
GGCTTCCAGC AGGATGGCAG CGATCCCATT GCAGGCCGAT GGTCCCAAGG CCAGTCGATC
GACGGCAAAG GCAGCTTTAA AGCCGGTCCG ACCATGGCGA TGGGACAGAA GCCCACACTC
GCTCCGGCCA AGCCGAACAG CGGTGCGCAG TCGGAGCAGA TGTGA
 
Protein sequence
MFFTDGKLQY PVRVETPDPL FARALQQAIG GVEGEIRVAM QYFFQACGAR GNTKFRDLLM 
NTAAEELGHI EMLATAVALN LEGAPLSIRE EVAGDPVGGA VLGGINLKNL LSSGLAAMPV
DSDGVPFDMS HIYASGNIAA DMTANVTAEA TGRVLAVRLY GMTNDPGMKD MLSFLIARDT
MHQNQWLAAL EELGGHEKAF PIPNSFPQDQ EQQEFSYAFL GFQQDGSDPI AGRWSQGQSI
DGKGSFKAGP TMAMGQKPTL APAKPNSGAQ SEQM