Gene Smed_6386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6386 
Symbol 
ID5320689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp48721 
End bp49623 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID640777971 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001314903 
Protein GI150378309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCGC CCTCAACCCG CAGAGCAGCG CGGCACGGGA CGACGGCACA CAGGAGCTGT 
GCTCCGGCCT CGCTTACCGG CGTCTTGGCA TTTGTTAATG TCGTGTCCTT CGGAAAACCG
GGCGCCGACG ACCGCGAGTG GGTTCTGATC GACGCGGGTG TGATCGGAAC GACCGGCCTG
ATTACGGGGG CCGCCGAGGA ACGTTTCGGA CCAAAGTCAC GCCCGGCGGC GATCGTTATG
ACCCATGGAC ATTTCGACCA CGTCGGCGCT CTCGAGGAGC TTTCCGAACG GTGGCAGGCG
CCCGTTTACA CGCACGGGCG CGAGCGACCC TATCTCGACG GCAGCGCCGC ATATCCTCCG
CCGGATCCCT CGGTCGGCGG CGGCCTCATG TCGATGTTGT CCCCGCTCTA TCCACGCGGC
CCCCGTGGAC GTGAGCCGTT GGCTTCTGAC CTTGCCGGAG GATGGCAGCG TCCCGCAGAT
GCCCGGCTGG CGCTGGCTTC ACACGCCCGG ACACACCCCT GGTCACATAT CGCTCTGGAG
GGAGGCAGAC CGGACGATCA TCGCGGGCGA TGCCTTCATA ACGACACGGC AGGAGTCCGC
CTATGCCGTG GCAGTGCAGG AGCCAGAGAT GCACGGCCCC CCGATGTACT ACACGACGAC
TGGGGCAATG CCCGCAGCTC GGTCGAACTG CTCGCCTCGC TTGAGCCCGA CAGGGTGATC
ACCGGTCACG GCCCTGCCGT GCAGGGCGCC CAGATGCGTG ACGCACTCCA TCGGCTCGAA
TCAAATTTCG ACCGTGTGGC CGTGCCTAAG GGAGGGAAAT ACGTGGAGAC CCGCCGCCGA
ACGAAAAGGG CGGTGAGTAC AGGCAGCCCT GATTTTCACG AACCGGAATC TCTTGCCCCT
TGA
 
Protein sequence
MVAPSTRRAA RHGTTAHRSC APASLTGVLA FVNVVSFGKP GADDREWVLI DAGVIGTTGL 
ITGAAEERFG PKSRPAAIVM THGHFDHVGA LEELSERWQA PVYTHGRERP YLDGSAAYPP
PDPSVGGGLM SMLSPLYPRG PRGREPLASD LAGGWQRPAD ARLALASHAR THPWSHIALE
GGRPDDHRGR CLHNDTAGVR LCRGSAGARD ARPPDVLHDD WGNARSSVEL LASLEPDRVI
TGHGPAVQGA QMRDALHRLE SNFDRVAVPK GGKYVETRRR TKRAVSTGSP DFHEPESLAP