Gene Smed_6380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6380 
Symbol 
ID5320683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp42622 
End bp43335 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content56% 
IMG OID640777966 
Producthypothetical protein 
Protein accessionYP_001314898 
Protein GI150378304 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCACAGT TTATTTCTGC CGTGAGTGGC AAAGGTGGGG CTGGGAAGAC AACAGCAGTA 
ATCTTGATCG GCGGGGAATA TGCGCTGCAG GGAAAGCGTG TCCTTCTCAT CGACGCAGAC
GGCCGCCAAA ATCTGCAGGA ATGGTGGAAG CGCTGTGAGG CAAAGGACAA CCTGCCCGCC
AACATCGAGC TTATAACCGC CGCCCGCCAG ACGACCGTTC AGCAGCTCAT CGAGAACGAT
GCGAATAAGT TCGACGTCGT TTTGATGGAC TCGCCCGGAC AGGACACCGT TCTAAAGGAC
ACAATCATCG CCGGATCCGA TATTGTGCTG ACGCCGATCC AGCCGAACCA GGACGAGATC
AAGGCGGCAG GACAGGCGGC GGCCGACACG GCCGATATTT CTGACAAGAT AGGGAGGGAA
ATTCCTCACG CCAACCTCGT AACCAGGATC ACCATGCCGG CGAAACTGCT GGAGGCCTAC
CGCCTGATCA GGCCGTTCGT GCAGAACCTG CAGGAAGGGG GCTACGACTC CTATCTGCTC
AAAACGGAGC TAATGGAGCG AAATTGCTAT CGCGAAATTC GAAATGGCTA TGGCACCGTG
CAAATGCTCG AACTGACAGA GCCGGTGAAA AAAGCGAGGG CGGAAGTGAT GGGCCTGGTT
CGGGAGATAG AAGCGCTTTT GGTAGGCAAG AAGGAAGTTG CAGCGAATGG CTAA
 
Protein sequence
MPQFISAVSG KGGAGKTTAV ILIGGEYALQ GKRVLLIDAD GRQNLQEWWK RCEAKDNLPA 
NIELITAARQ TTVQQLIEND ANKFDVVLMD SPGQDTVLKD TIIAGSDIVL TPIQPNQDEI
KAAGQAAADT ADISDKIGRE IPHANLVTRI TMPAKLLEAY RLIRPFVQNL QEGGYDSYLL
KTELMERNCY REIRNGYGTV QMLELTEPVK KARAEVMGLV REIEALLVGK KEVAANG