Gene Smed_6379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6379 
Symbol 
ID5320682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp42192 
End bp42638 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content57% 
IMG OID640777965 
Producthypothetical protein 
Protein accessionYP_001314897 
Protein GI150378303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCGAA TGGCTAAGGG TCAAACGACA GTTTCTGACT TCGCAGTCGC GCCACGTCGC 
AGTCGTCCGG AGGAGCAATC CACTACGCAG CCAGCCTCCG AGAGCAAGCC GGCTGAGCTG
TCGACGGAAC CGCCGAATGC AAATCAGTCC CAAGAAGCAG CACCTGCCGG AACTGAGGGT
GATAAGCCCG TCAACCGTTT GATCGCCCCG ACAGACGAAG CTCGGCGCGA ACGCGCCACC
ACGAGAGCGT TGCAGCGGGA AGGATCGAGA ATTCGCTTGC GCGACCTGAA AAGGGCGCGC
GATCGAGAAT CCAAGCACTA CGTCAATTGC CCGCTGGATT ACGACACTAA GATGCGGCTG
CAAAAGGCCG CGATCGAGAA CGACGTCAAA ATGACAGTCA TCATGAAGGC GGCGATCGAT
CAGTTCCTCA AAGATAACGG CTATTGA
 
Protein sequence
MQRMAKGQTT VSDFAVAPRR SRPEEQSTTQ PASESKPAEL STEPPNANQS QEAAPAGTEG 
DKPVNRLIAP TDEARRERAT TRALQREGSR IRLRDLKRAR DRESKHYVNC PLDYDTKMRL
QKAAIENDVK MTVIMKAAID QFLKDNGY