Gene Smed_6375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6375 
Symbol 
ID5320678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp39464 
End bp39784 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content59% 
IMG OID640777962 
ProductXRE family transcriptional regulator 
Protein accessionYP_001314894 
Protein GI150378300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATG CTTTTAGCAA CCTGGACGTC GTCATGTGCC GAGGCCGCGT CGATATAGGT 
GGCGCTGTCA GGCAATCTCG CCAGATCAAG GGGTACAGCG TCGAGGACCT CTCCTTGACC
TGCGGTCTTA CCGCCGCCGA AATTACAAGG ATCGAACTGG GCGTCGATGT CGATCCCGCC
AGGCTCAGGC GCATTGCCGC TGCACTCCAG GTACCGACCT CCACGTTCCG CTTGGCTAAA
CAATCGGGTC CGCGCCTCCT TCAGGCACGA CTCCATTCAG TCAAGCAAAG CCTCGAACAC
TCGGCAGGTG ACATCGTGTA G
 
Protein sequence
MTNAFSNLDV VMCRGRVDIG GAVRQSRQIK GYSVEDLSLT CGLTAAEITR IELGVDVDPA 
RLRRIAAALQ VPTSTFRLAK QSGPRLLQAR LHSVKQSLEH SAGDIV