Gene Smed_6365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6365 
Symbol 
ID5320668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp30208 
End bp30564 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content60% 
IMG OID640777956 
ProductIS66 Orf2 family protein 
Protein accessionYP_001314888 
Protein GI150378294 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGAG TTTCGCCGAA TGCCGTGAAG ATCATGGTGG CGACGCAGCC TGTCGACTTC 
CGGCGCGGCA TGAATGGCCT GGTGGCTTTG GTGGCATCAG CGCTTGCGGC CGATCCCTAT
TGTGGCGACG TGTTCGTGTT CCGGGCCAAG CGTCTCGATC GACTTCGCTG CATTTACTGG
GACGGATCAG GCATGATCCT GGTGACGAAA TGGCTGGAGG CGGGCAAGTT CGTTTGGCCA
CCGATCCGCG ATGGCGCGAT GCAGATGAGT AGCCAGGAGT TCTCGCTTTT GTTGGCCGGT
ATCGACTGGA CGCGGGTCAA ACGAAACGCG GTAAAGCGAC CGACGAAAGC AGGCTGA
 
Protein sequence
MIGVSPNAVK IMVATQPVDF RRGMNGLVAL VASALAADPY CGDVFVFRAK RLDRLRCIYW 
DGSGMILVTK WLEAGKFVWP PIRDGAMQMS SQEFSLLLAG IDWTRVKRNA VKRPTKAG