Gene Smed_6346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6346 
Symbol 
ID5320649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp14195 
End bp14617 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content59% 
IMG OID640777940 
Producthypothetical protein 
Protein accessionYP_001314872 
Protein GI150378278 
COG category[S] Function unknown 
COG ID[COG5478] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.343516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.443955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGG CCAATGGTTT CAGCAGGTTT GCAAGTACGG TGGCGGAATA TTCCGGGCGC 
CCCGCCGTCT TTGTCCTCGC CCTTGTAGCG ATAGCCGTGT GGGGCCTCAC AGGCCCGATC
TTCGGTTTTT CCCAGACGTG GCAACTCGTC GTGAATACCG GCACGACGAT CGTCACCTTC
CTGATGGTCT TCGTCCTTCA GAACACGCAG AACCGGGACG GCCGGGCGCT GCAGGCGAAG
CTCGACGAGC TCATTCTCAC CAGCGCGGCT GAGAACAGTT ATGTAGGCAT CGAAAGGCTG
GACGAGAAAG AGCTGAAACG CCTGGCCGAG ATCCTCCAGC AGCACGCTCA CGATAAAGAC
GATCATACGC TTCGGGAAAA GGTCTCGAAC GCTATCAGCC GGCAGCCGCC GGCCCGGAGT
TAG
 
Protein sequence
MPKANGFSRF ASTVAEYSGR PAVFVLALVA IAVWGLTGPI FGFSQTWQLV VNTGTTIVTF 
LMVFVLQNTQ NRDGRALQAK LDELILTSAA ENSYVGIERL DEKELKRLAE ILQQHAHDKD
DHTLREKVSN AISRQPPARS