Gene Smed_6345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6345 
Symbol 
ID5320648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp13165 
End bp13722 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content59% 
IMG OID640777939 
Producttransposase mutator type 
Protein accessionYP_001314871 
Protein GI150378277 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0442764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.442259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCAAGA CCAACCTGAT GGAAAGATCA CCGATGACCG ATGACATGAT GAACGTGCGC 
TCGCTTGTTG AGAAGAGCGC CGATGCGGAT TTGTTGGGCG AGATGATTGG CTTTGCGGCC
GAGCGGTTGA TGGAGCTGGA GGTTGGCGGC GCGACCGGTG CTGGTTTCGG TGAGAAGAGC
CCTATGCGGC TCGCCCAGCG CAACGGCTAC CGTGACCGCG ATTGGGAGAC GCGCGCCGGA
ACCGTTGAAC TGCGCATTCC CAAGTTGCGC AAGGGTAGCT ATTTCCCAAG CTTCCTAGAG
CCGCGTCGAA TGGCAGAGAA GGCTCTGACG GCCGTCATTC AGGAAGCCTA CATTCAAGGC
ATCGCGACGC GCTCGGTTGA TGATCTGGTC AAGGCCATGG GCATGAGCGG CATCTCCAAG
AGCCAGGTGT CGCGGCTATG CGAGGAGATC GACGTCAAGG TGAAGGCGTT CCTCGACAGG
CCGATTGAAG GTGACTGGCC ATACATCTGG ATCGATGGTG CGCCGTGCGG CGCGGGAGGT
GCGCATGAGT TAGCGTGA
 
Protein sequence
MFKTNLMERS PMTDDMMNVR SLVEKSADAD LLGEMIGFAA ERLMELEVGG ATGAGFGEKS 
PMRLAQRNGY RDRDWETRAG TVELRIPKLR KGSYFPSFLE PRRMAEKALT AVIQEAYIQG
IATRSVDDLV KAMGMSGISK SQVSRLCEEI DVKVKAFLDR PIEGDWPYIW IDGAPCGAGG
AHELA