Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6345 |
Symbol | |
ID | 5320648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009622 |
Strand | - |
Start bp | 13165 |
End bp | 13722 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640777939 |
Product | transposase mutator type |
Protein accession | YP_001314871 |
Protein GI | 150378277 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0442764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.442259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCAAGA CCAACCTGAT GGAAAGATCA CCGATGACCG ATGACATGAT GAACGTGCGC TCGCTTGTTG AGAAGAGCGC CGATGCGGAT TTGTTGGGCG AGATGATTGG CTTTGCGGCC GAGCGGTTGA TGGAGCTGGA GGTTGGCGGC GCGACCGGTG CTGGTTTCGG TGAGAAGAGC CCTATGCGGC TCGCCCAGCG CAACGGCTAC CGTGACCGCG ATTGGGAGAC GCGCGCCGGA ACCGTTGAAC TGCGCATTCC CAAGTTGCGC AAGGGTAGCT ATTTCCCAAG CTTCCTAGAG CCGCGTCGAA TGGCAGAGAA GGCTCTGACG GCCGTCATTC AGGAAGCCTA CATTCAAGGC ATCGCGACGC GCTCGGTTGA TGATCTGGTC AAGGCCATGG GCATGAGCGG CATCTCCAAG AGCCAGGTGT CGCGGCTATG CGAGGAGATC GACGTCAAGG TGAAGGCGTT CCTCGACAGG CCGATTGAAG GTGACTGGCC ATACATCTGG ATCGATGGTG CGCCGTGCGG CGCGGGAGGT GCGCATGAGT TAGCGTGA
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Protein sequence | MFKTNLMERS PMTDDMMNVR SLVEKSADAD LLGEMIGFAA ERLMELEVGG ATGAGFGEKS PMRLAQRNGY RDRDWETRAG TVELRIPKLR KGSYFPSFLE PRRMAEKALT AVIQEAYIQG IATRSVDDLV KAMGMSGISK SQVSRLCEEI DVKVKAFLDR PIEGDWPYIW IDGAPCGAGG AHELA
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