Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6339 |
Symbol | |
ID | 5320642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009622 |
Strand | + |
Start bp | 6620 |
End bp | 6973 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640777933 |
Product | IS66 Orf2 family protein |
Protein accession | YP_001314865 |
Protein GI | 150378271 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.191496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGAC TGGGCGCTGA TCTCAAGGTC TACCTGCACC GCGAACCGAT CGACTTTCGG GCGGGCATCA ACAGCCTTGC GGTTCTGGTC CAGGAGACGA TGGCGCTCGA TCCGTTTGCT CCAGCGGTTT TTGCCTTCTG CAATCGCCGT CGTGACCGGA TGAAGCTCCT ATTCTTCGAC CGATCGGGCT TTGTGCTGGT CCTGAAGCGG TTGACAGAGG ACAAGTTCCG ATGGCCCCGC CGTGAGGTGG CGGTGGTCAC GCTGACGACC GAGCAACTGC ATTGGATCCT CGACGGCATC GATATCGATG CGATGGTCCG CCACCCGGTG CGGCAATACC AGGTCGCCGG CTGA
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Protein sequence | MFRLGADLKV YLHREPIDFR AGINSLAVLV QETMALDPFA PAVFAFCNRR RDRMKLLFFD RSGFVLVLKR LTEDKFRWPR REVAVVTLTT EQLHWILDGI DIDAMVRHPV RQYQVAG
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