Gene Smed_6339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6339 
Symbol 
ID5320642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp6620 
End bp6973 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content60% 
IMG OID640777933 
ProductIS66 Orf2 family protein 
Protein accessionYP_001314865 
Protein GI150378271 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.191496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAC TGGGCGCTGA TCTCAAGGTC TACCTGCACC GCGAACCGAT CGACTTTCGG 
GCGGGCATCA ACAGCCTTGC GGTTCTGGTC CAGGAGACGA TGGCGCTCGA TCCGTTTGCT
CCAGCGGTTT TTGCCTTCTG CAATCGCCGT CGTGACCGGA TGAAGCTCCT ATTCTTCGAC
CGATCGGGCT TTGTGCTGGT CCTGAAGCGG TTGACAGAGG ACAAGTTCCG ATGGCCCCGC
CGTGAGGTGG CGGTGGTCAC GCTGACGACC GAGCAACTGC ATTGGATCCT CGACGGCATC
GATATCGATG CGATGGTCCG CCACCCGGTG CGGCAATACC AGGTCGCCGG CTGA
 
Protein sequence
MFRLGADLKV YLHREPIDFR AGINSLAVLV QETMALDPFA PAVFAFCNRR RDRMKLLFFD 
RSGFVLVLKR LTEDKFRWPR REVAVVTLTT EQLHWILDGI DIDAMVRHPV RQYQVAG