Gene Smed_6333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6333 
Symbol 
ID5320636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp2698 
End bp3741 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content50% 
IMG OID640777929 
Producthypothetical protein 
Protein accessionYP_001314861 
Protein GI150378267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0138128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.366541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGAGA TGCTTTGCCG GATCAAATGG ATTGCGATTG CACTTGCGAT GGCGTTCCCG 
GGCTCTTCAT CGGCAGATTG TTTGCCCCGC GAAACGGCCC CTGGGGATTT CTTGAACACA
CCAAAGGTGT GGGGGACGAC TGACAGTGGC CCCATTTTGG ATGGCTTCCT AGAGTTACGG
AATGAAACCG GTCTGCATAA AATCGAGCAC GGCGTCGATC TATCTCACCA CAACGATCAG
ATTGTGTATG ATGAACTGAA ACGGTGCGGG GCAAGTTTTG CCATCGTCAA GATGGACAAG
CGCTTCGATT CCCACAAAAC AGAGCTTAGC AAGCACGGTA TGCGCGTCAT TCCATATCAC
TACCTGTCGG TCGTGGGTAG CGGAGGGTTG GATTACAAGA GGCACCCATC GGCATTTACT
TTGGCTGCCA CATCGGAAGC GACGAGGAAC GGTGGCCTCC TAGGAGTCGC CGAGCAAATG
GGACGTTCAA AAGCCGCGCG ATTCATAACC CTGTATCATG CAGCGCTGAC AGAGGACGAA
AGGGTCTCGG AGCTTTCCGG TTTGCAGGGG AAGATAATCG TCCTTGATGT GGAAGAACAT
TTCACCGTTC CGTCTTCGCA AAAACAACGT ATTTCGTTCG GTCGATTTTA TGCCGCGATG
CTCGCGTCTT GGGTGAATAC AGTCAAAAAC GCCCATCCCG ATGCTAAAAT TGTGTTCTAT
ACGTTCCCTG ATATTTACAC GAGTTATCTA CAATTCGCCC ATCCACAAGA TCACGCGATC
ATTCATGGGA TGCCCGTTTG GCTTGCCAGA ACGAGAGGTG ATGCAAGTGA TTTTGACTTG
AAGACGAGTA AACAGCTGCA GCGGATATGT TTGTCTGCCT CTGGTGGCAA CAAGTGCATT
TTGCATCAGT ACAGTCATCG CGCAATCTTT GGCGTTCGAA AGGTCCCAAG ACGCAATCCC
CCCCTGCACA TTGATGTAAA CAGGCTCTTC GCTGTAAAAG AAATTTCGGA CACCTTGGGC
AATCAGTACG TTCGATCCGA TTGA
 
Protein sequence
MIEMLCRIKW IAIALAMAFP GSSSADCLPR ETAPGDFLNT PKVWGTTDSG PILDGFLELR 
NETGLHKIEH GVDLSHHNDQ IVYDELKRCG ASFAIVKMDK RFDSHKTELS KHGMRVIPYH
YLSVVGSGGL DYKRHPSAFT LAATSEATRN GGLLGVAEQM GRSKAARFIT LYHAALTEDE
RVSELSGLQG KIIVLDVEEH FTVPSSQKQR ISFGRFYAAM LASWVNTVKN AHPDAKIVFY
TFPDIYTSYL QFAHPQDHAI IHGMPVWLAR TRGDASDFDL KTSKQLQRIC LSASGGNKCI
LHQYSHRAIF GVRKVPRRNP PLHIDVNRLF AVKEISDTLG NQYVRSD