Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6330 |
Symbol | |
ID | 5320633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009622 |
Strand | + |
Start bp | 297 |
End bp | 965 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640777926 |
Product | hypothetical protein |
Protein accession | YP_001314858 |
Protein GI | 150378264 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000557698 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.19569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAGAT CGATATTTTC GTCGGTGTTG GCTTTGGTTC TTGTAGGGTG TGGACAAACA GACTTTGTTA CCTATTCGCC AACAACCATT CTGGCAAAGT ATGGATATTC TATCCACGTC CCACCCTCAT CTCTTCATGG GCCGGGAAAC CTTGTATGGA AGAGACAAGC AGCTTCTTCA TCTGAAAATC AGTTAATCCT CGGCGATATC TGTTCGCCGA AATTTATCGC TTTTCCCGAT TCCCTAAGTA GATCAAGCGC TGAGTCGTTA GATTTCTCTA AAAATAGGGA TTTCAAGTTC ACAGCAAATG GGCTGAAAAA ACTCGGATTG CAATTGTCTG CGACGTATTT GAGCAGTGTG AACATTTCGT TCAAGAATAC CGAAGTCCAA GAGTACTCCT TGGAGGACCT CCGTTCGATC AGGAATTCCC TGGGGCCCGT CTGTTCCGAC TTATTGGAGC GACAACGGGC GAAAGGAAAC GCCTACCAGG TGGTCGGCGC CTTCAAAGCC GATTTGGAGT ACAAGCTGAC ATATAAACGC GCCGCGTCTG CGGGGATCGC TCGGCTCATT CAAAAGGAAC TGGCGGCGGA GTTCGGAATA GACTTCGAGG GGCAGCAACG ACAGGTCGGC AAAGGCCTGT TCTATGGTCT TTATCTCGAC ACTCTCTAA
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Protein sequence | MVRSIFSSVL ALVLVGCGQT DFVTYSPTTI LAKYGYSIHV PPSSLHGPGN LVWKRQAASS SENQLILGDI CSPKFIAFPD SLSRSSAESL DFSKNRDFKF TANGLKKLGL QLSATYLSSV NISFKNTEVQ EYSLEDLRSI RNSLGPVCSD LLERQRAKGN AYQVVGAFKA DLEYKLTYKR AASAGIARLI QKELAAEFGI DFEGQQRQVG KGLFYGLYLD TL
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