Gene Smed_6330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6330 
Symbol 
ID5320633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp297 
End bp965 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content49% 
IMG OID640777926 
Producthypothetical protein 
Protein accessionYP_001314858 
Protein GI150378264 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000557698 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.19569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGAT CGATATTTTC GTCGGTGTTG GCTTTGGTTC TTGTAGGGTG TGGACAAACA 
GACTTTGTTA CCTATTCGCC AACAACCATT CTGGCAAAGT ATGGATATTC TATCCACGTC
CCACCCTCAT CTCTTCATGG GCCGGGAAAC CTTGTATGGA AGAGACAAGC AGCTTCTTCA
TCTGAAAATC AGTTAATCCT CGGCGATATC TGTTCGCCGA AATTTATCGC TTTTCCCGAT
TCCCTAAGTA GATCAAGCGC TGAGTCGTTA GATTTCTCTA AAAATAGGGA TTTCAAGTTC
ACAGCAAATG GGCTGAAAAA ACTCGGATTG CAATTGTCTG CGACGTATTT GAGCAGTGTG
AACATTTCGT TCAAGAATAC CGAAGTCCAA GAGTACTCCT TGGAGGACCT CCGTTCGATC
AGGAATTCCC TGGGGCCCGT CTGTTCCGAC TTATTGGAGC GACAACGGGC GAAAGGAAAC
GCCTACCAGG TGGTCGGCGC CTTCAAAGCC GATTTGGAGT ACAAGCTGAC ATATAAACGC
GCCGCGTCTG CGGGGATCGC TCGGCTCATT CAAAAGGAAC TGGCGGCGGA GTTCGGAATA
GACTTCGAGG GGCAGCAACG ACAGGTCGGC AAAGGCCTGT TCTATGGTCT TTATCTCGAC
ACTCTCTAA
 
Protein sequence
MVRSIFSSVL ALVLVGCGQT DFVTYSPTTI LAKYGYSIHV PPSSLHGPGN LVWKRQAASS 
SENQLILGDI CSPKFIAFPD SLSRSSAESL DFSKNRDFKF TANGLKKLGL QLSATYLSSV
NISFKNTEVQ EYSLEDLRSI RNSLGPVCSD LLERQRAKGN AYQVVGAFKA DLEYKLTYKR
AASAGIARLI QKELAAEFGI DFEGQQRQVG KGLFYGLYLD TL