Gene Smed_6328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6328 
Symbol 
ID5320630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1243208 
End bp1244299 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content66% 
IMG OID640777925 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001314857 
Protein GI150378262 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCC CGATGAATCC CGTCTTCACC TCTGTCCGCG TCGGCCGCTA CGCTCTGTCG 
AACCGCCTCG TCATGGCCCC GATGACCCGC AGCCGCGCCG GCTTCGACGG TACGCCGGGA
GAGCTGGCTG CCAAGTATTA TGCTCAGCGC GCCGCGCTCG GCCTGATCGT CACTGAAGGC
ACCCAGCCCT CGGATGACGG CCAGGGCTAT CTCACCACTC CGGGCATCTA CACGCCCGCC
CATATCGTCG GCTGGCGGAA GGTCACCTCC GCCGTCCATG ACAAAGGCGG CCATATCTTC
ATCCAGCTCA TGCACGCCGG ACGTATGTCG CATCCTGACA ACACACCGCA TCACCGCCAG
GGCGTCGCCC CGTCAGCGAT CGCGCCGGGC GCGGGCATGT TCACGGCAAC GGGAATGCAG
GACATTCCCG CGCCGCGCGC GCTGACGACT GAAGAGGTGC GCCAGACCGT CGCCGATTTC
CGCCATGCGG CCCGCTCGGC CATCGAGGCC GGCTCCGACG GCGTCGAGAT TCACGGTGCC
AACGCCTATC TCGTCCAGCA GTTCTTCGCG CCAAGCGCCA ACACGCGCAC CGACGAATAT
GGCGGCTCCA TCGAGAACCG CGCCCGCTTT GCCATTGAGG TCGCCAGGGC GATCGCAGAG
GAGATCGGCG CGGACCGCAC CGCGATCCGC CTGTCGCCGG GTGCGACCTT GTGGGGAATC
GACGAAGGCG CCGAAGGGCC GGACCTCTAC CGCTATCTCG TCGCCGAACT CGACCAGCTC
GGGCTCGCCC ATCTGCATAT CTTGCACCAG GGCAACGAGC CGTTGCTGAG CGACATCCGC
AAGCTCTGGC ACCAGTCGCT GATCCTCAAC CGGCCGGGTC GTCCGCGCGA CCAGATTGGC
GGCGACGTGG CTTCGGGGCT GGCCGATCTC GAAGCCTATG GGCAGATGGT CCTTGCCAAT
CCGGACTTCG TCGTGAGGCT GAAGGCCGAT GCCGGGATGA ACGAGGCTGA CCACAGCACC
TTCTTCGGTG GCACCGCGCG AGGCTACACC GATTACCCCG CCCTGAGCGC CCGAACCGAT
ATCGGATCAT GA
 
Protein sequence
MEIPMNPVFT SVRVGRYALS NRLVMAPMTR SRAGFDGTPG ELAAKYYAQR AALGLIVTEG 
TQPSDDGQGY LTTPGIYTPA HIVGWRKVTS AVHDKGGHIF IQLMHAGRMS HPDNTPHHRQ
GVAPSAIAPG AGMFTATGMQ DIPAPRALTT EEVRQTVADF RHAARSAIEA GSDGVEIHGA
NAYLVQQFFA PSANTRTDEY GGSIENRARF AIEVARAIAE EIGADRTAIR LSPGATLWGI
DEGAEGPDLY RYLVAELDQL GLAHLHILHQ GNEPLLSDIR KLWHQSLILN RPGRPRDQIG
GDVASGLADL EAYGQMVLAN PDFVVRLKAD AGMNEADHST FFGGTARGYT DYPALSARTD
IGS