Gene Smed_6323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6323 
Symbol 
ID5320625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1237675 
End bp1238067 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content62% 
IMG OID640777921 
Productcytochrome c class I 
Protein accessionYP_001314853 
Protein GI150378258 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGCG CAACCATGTT CTCGACCGCC ATCCTCGGTC TGCTTCTCTG TTCCAGTATA 
GCCTCGGCTC AGGAGCATGC CGGCCCCGAT GGCGAGAGGC TTTTCCGCAG CCGTTGTGGC
TCCTGTCACG GCCTGAACAC GGGTGAAAAC CGCGTCGGGC CGCACCTTTT CGGGGTTTTC
GGGCGTGCTG CAGGCAGTGT TGCGGGCGCT CGCTACTCGA ACGCGCTCCG CACGTCCGGC
TTCGTCTGGG ACGAGGAACG CCTCCACGCC TATCTGAACA ATCCTCGTCA GGTCGTGCCG
GGTACTACCA TGAGCGCCAG CGTTCGCGAC CAGGCTCAAC GCTCGGCCAT CATCACATAT
CTGCAAAGCC TTTCGGCGGA GCCGCCCAAC TAG
 
Protein sequence
MKCATMFSTA ILGLLLCSSI ASAQEHAGPD GERLFRSRCG SCHGLNTGEN RVGPHLFGVF 
GRAAGSVAGA RYSNALRTSG FVWDEERLHA YLNNPRQVVP GTTMSASVRD QAQRSAIITY
LQSLSAEPPN