| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6312 |
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| Symbol | |
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| ID | 5320614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1226519 |
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| End bp | 1227463 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777910 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314842 |
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| Protein GI | 150378247 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0342399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCTC CCCGTGCTGC ATATCCCCTG ACGTGGCGCG TCATGGATGT GCTCGAACGC
CTTGCGGCCA TCGTCTGGCC ATCGAGCTTC CAGCGGGGCC TGCCCTATCT CATGCTGATG
CCCGCGCTCG TGCTTGTGGG CCTTTTGGTG CTCGGTCTCG TCCAGATCGG CGACACGAGC
CTGAGAACGC TCGACACCAA TACCTTCCTG ATGTCGGAGA GCTACACGCT CGCCAATTAT
CAGCGTGTTC TGACCGAAAG CTTCTTCGCG ACGGTTGCCG GCCGCAGCCT TGTCGGTTCG
GTGATCGTGA CGGTGATCAC CTTGCTGCTC GCTTTTCCAT ATGCCTACGT CATGGTGCGT
ACGCCGTCGT CCGCGCTTCG CAAGTTTCTG CTGGTTGCTC TTTTCCTGCC CTTCTTCATC
GGGCAGGTGG TGCGCGCCTA TGGCTGGCTC ATCATTCTCG GCAACCAGGG CATGGTCAAC
GAGGCGCTCG GCCTCGTCGG CGTGCCGCCG ATACGTCTGC TCTACAACTA CCCGGCGGTC
CTTTTCGGCC TCGTCCAGTA CATGCTGCCT TTCGCGGTGC TGATGCTCGC ACCGGCTCTG
ACCGCTATCC CGGGCGAACT CGAGTCCGCT GCCGCCTCGC TTGGCGCGGG CTGGACCCGG
ACATTCCGCC ACATCGTTCT GCCGCTCTCC CGGCCGGGGC TGGTGGGTGC CGGTTTGGTG
GTATTGACGC TGTCGCTCAC CGACTTCGCC ATTCCCGCCA TCCTCGGCGG CGGCACGCAG
GATTTTATCG CCAACGCGAT ATACGACCAG TTCTTCCGCA CCTCCGACCA GGGCATGGGT
GCCACGCTGT CGCTGATGCT CGTCGCGGTC GGGTCCATGC TCGTCGGCGT CGTCTTCATG
CTGTTCGGTG CAGGTACGCT CGCCATGACG GGAGACCGCA AATGA
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| Protein sequence | MRAPRAAYPL TWRVMDVLER LAAIVWPSSF QRGLPYLMLM PALVLVGLLV LGLVQIGDTS
LRTLDTNTFL MSESYTLANY QRVLTESFFA TVAGRSLVGS VIVTVITLLL AFPYAYVMVR
TPSSALRKFL LVALFLPFFI GQVVRAYGWL IILGNQGMVN EALGLVGVPP IRLLYNYPAV
LFGLVQYMLP FAVLMLAPAL TAIPGELESA AASLGAGWTR TFRHIVLPLS RPGLVGAGLV
VLTLSLTDFA IPAILGGGTQ DFIANAIYDQ FFRTSDQGMG ATLSLMLVAV GSMLVGVVFM
LFGAGTLAMT GDRK
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