Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6294 |
Symbol | |
ID | 5320596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 1211330 |
End bp | 1212016 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640777893 |
Product | NnrU family protein |
Protein accession | YP_001314825 |
Protein GI | 150378230 |
COG category | [S] Function unknown |
COG ID | [COG4094] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGT TCCTACTGTC GCTGTTTGTC TTTCTCATCC TTCACTCGAT TCCGGCGATC CCCGTCATCC GCGAGCGTCT GTTGTTCCTG CTTGGGAGGG GGGGCTATTT CTCGCTCTAT TCGCTCGCTT CCATCCTCGC GCTCGCTTGG GTGCTCTACG CCGCCCTTGA TGTCGACTAC GTCCCGCTTT GGCAGCCTGC GGCCTGGCAG GCCTGGGTGA CCATGATTGC CGCTCCAGTC GGCGTGTTTC TCGTGCTCGC CGGTCTCTTC AGTGTCAATC CGCTATCGGT CTCGATTCGC CAAGGGCAGA GACCGGGCTC AATCGTCTCG GTTACTCGCC ACCCGGTTCT CTGGGGTTTC GCCATCTGGG CGCTCGGCCA TCTCGTCGCC AACGGAGACG TGCGCTCGCT GATCCTCTTC GGCGGCTTTG CCCTTTTTGC TCTTGGGACC ATACCTATGA TCGAGAAGCG CGGCCGGCGC CGACTTGGAG ATCAATGGCA CCGCCAGTCT GCGAAGACCT CCATTCTGCC GTTCGCCGCC CTCTTCACCG GCCGCACCCC CGTGTCGGGC GATGCGCCGA TCGCCATCGC CACCGTGGCA ACCGCAGTCT TGACCTTATG GCTGCTTGCC GGAGGCCATG CCGCACTGTT TCATGCCGAC CCCCTTCTCT TGGCGACGGC ACAATAG
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Protein sequence | MAEFLLSLFV FLILHSIPAI PVIRERLLFL LGRGGYFSLY SLASILALAW VLYAALDVDY VPLWQPAAWQ AWVTMIAAPV GVFLVLAGLF SVNPLSVSIR QGQRPGSIVS VTRHPVLWGF AIWALGHLVA NGDVRSLILF GGFALFALGT IPMIEKRGRR RLGDQWHRQS AKTSILPFAA LFTGRTPVSG DAPIAIATVA TAVLTLWLLA GGHAALFHAD PLLLATAQ
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