Gene Smed_6294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6294 
Symbol 
ID5320596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1211330 
End bp1212016 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content62% 
IMG OID640777893 
ProductNnrU family protein 
Protein accessionYP_001314825 
Protein GI150378230 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGT TCCTACTGTC GCTGTTTGTC TTTCTCATCC TTCACTCGAT TCCGGCGATC 
CCCGTCATCC GCGAGCGTCT GTTGTTCCTG CTTGGGAGGG GGGGCTATTT CTCGCTCTAT
TCGCTCGCTT CCATCCTCGC GCTCGCTTGG GTGCTCTACG CCGCCCTTGA TGTCGACTAC
GTCCCGCTTT GGCAGCCTGC GGCCTGGCAG GCCTGGGTGA CCATGATTGC CGCTCCAGTC
GGCGTGTTTC TCGTGCTCGC CGGTCTCTTC AGTGTCAATC CGCTATCGGT CTCGATTCGC
CAAGGGCAGA GACCGGGCTC AATCGTCTCG GTTACTCGCC ACCCGGTTCT CTGGGGTTTC
GCCATCTGGG CGCTCGGCCA TCTCGTCGCC AACGGAGACG TGCGCTCGCT GATCCTCTTC
GGCGGCTTTG CCCTTTTTGC TCTTGGGACC ATACCTATGA TCGAGAAGCG CGGCCGGCGC
CGACTTGGAG ATCAATGGCA CCGCCAGTCT GCGAAGACCT CCATTCTGCC GTTCGCCGCC
CTCTTCACCG GCCGCACCCC CGTGTCGGGC GATGCGCCGA TCGCCATCGC CACCGTGGCA
ACCGCAGTCT TGACCTTATG GCTGCTTGCC GGAGGCCATG CCGCACTGTT TCATGCCGAC
CCCCTTCTCT TGGCGACGGC ACAATAG
 
Protein sequence
MAEFLLSLFV FLILHSIPAI PVIRERLLFL LGRGGYFSLY SLASILALAW VLYAALDVDY 
VPLWQPAAWQ AWVTMIAAPV GVFLVLAGLF SVNPLSVSIR QGQRPGSIVS VTRHPVLWGF
AIWALGHLVA NGDVRSLILF GGFALFALGT IPMIEKRGRR RLGDQWHRQS AKTSILPFAA
LFTGRTPVSG DAPIAIATVA TAVLTLWLLA GGHAALFHAD PLLLATAQ