Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6286 |
Symbol | |
ID | 5320588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1205013 |
End bp | 1206908 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640777885 |
Product | von Willebrand factor type A |
Protein accession | YP_001314817 |
Protein GI | 150378222 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4548] Nitric oxide reductase activation protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.735218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGACT TCCTCGAGCT CGAAGAAACG GTCGGCCGCG CCTGGCATCG CTTGATCGGC AACACGCGCA CTTGGCCGCG CTTTCCGGAC GAGGCGGTCC GGCTCGGGGA GGTCCAGGCC GTGTTTGCCG TGTACTTCCG CGGTCTTGGC GGCGAGCGGG CGGTGCAGAT CGCGCCCGCC CGCGGTCGAA CCTCCGCGCA CCGGCTGCGC TTGCGCCAGC GCATGGGCCT TGGCGAGGAG AAGCTCGTCC AGCCGGCGCG CGACCATGCG ACGCTGATGC TGCCGGCAGA GGTCGATCTC TTTCCCTCTC GGCGTCTCAA CCGCGACCTG TATTTCTGGC TGGCGGCGAT GATGGCCGTC ATGCCACTCA AGCACGTCGG CGCCGCCGAC CCGCTATCGC GCGACTTGGC ACTCCTTTCA CGTGCCGGTG ATACGGTAAG GTCGGTGCTC GCCAGCTATC CAGCAATGCG CCAACGCTAT CGTCGCCTCT GCAGGGCGGT GCTCAACGTC CGGCAGCGGC GCTCGCTTCC TTCCGTCGAG CAGCACGTCG AAAACCGGAC ACTCTCCATG CTAAGAGCCG GTGCCGGTCT CAACGACGAA ATGCCGCCGG TCATCTTTCC AAGGTGTGCG CCAACCGGCT ATCTGCCGAT GCTTCCGGTA CCGCTATGGC CAGACGTGCT CCTGCGTGAA GAGACGGAGC GGCGAAACGG CGAGGACGAG CCCGCTCGCG GTGGCGATAG AGCGGAAGGG TCGGAGACGA CACGCCATGT GGCGACACGC GAGGCACAGC GGCAGTCCGA GCGGAGCCCG TTCATCCTCA ACCGCTTCGA GAAGATCCTC GCCATGGCCG AAATGGTCAA TGTCGACCGT CCGGCGGACG ACAGCGATGA CCACGACGCC AGCGCCGCCG ACGAACTCGA CGACATGACG CTCGGCGAAC GCAAGGGACG CCCGGCCGCG CGCTTTCGCT TCGACCTCGA CCTGCCCCCG GAAGCGCTGG ACCGCACGCC GCTCATGGCG GAACTCACCT ATCCCGAATG GGACTATCGC GGCGGCGGCT ACCTCAAGGA CCATTGCCGG GTGCTTGCCG CGCCCGCCTC GGCAGAAGGC CTGCCGGTAG AAGCGGATCC GACGACGAAG AGCCTGATCC GGCGTGTGCG CCGTCAGTTC GAGGTACTGC GGCCGCGTCA CGAGATGCTG AGGGCACAGA TCGATGGCGC CGACCTCGAT CTCGACGCGG TTGTGCGGGC GCGCACAGAC CTCAGGGCCG GCGGGCAGGG CAGCGACCGC ATCCACATGA TGAGCCGGCC GCAGGCGCAC GACCTTGCGG TGACGATCCT CATGGACGTG TCGCTCTCCA CCGACGCCTG GTTCGACGAT CTTCGCGTCC TCGATGTCGA GAAGCAAGCG CTTCAGGTCC TGGCGCATGG GCTTTCCGCC TGTGGCGATG CCCACGAAAT CCTCACCTTC ACGTCCCGGC GGCGAGATTG GGTGCGGATC GAGACCGTGA AGGCTTTCGA CGAGGCGATG AGCGCGACGA TCGAGGCGCG CATCGCGGCG CTGAAACCCG GCTACTACAC CCGCATGGGC GCGGCCATCC GCCACGCCGC AGCAAGGCTT GTCGAACGGC CGAACCGCCG CAAGCTCCTC ATTGTCCTAA CCGACGGCAA GCCCAACGAC GTCGACCACT ACGAGGGTCG TTTCGCGCTC GAGGACAGCC GCCGCGCCGT CGGTGAAACG CGCCGCTCGG GCATCAGCGT CTTCGGGGTG ACGGTGGATC GCGAGGCGAA ATCCTATGTG CCGGTCATAT TCGGCCAGAA CGGCTACGCC GTCGTCAGCA ATATCGGCAG GCTGCCTGCC GCCCTGCCGG CGATCTATCG CGGCCTTGTA AGCTAG
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Protein sequence | MLDFLELEET VGRAWHRLIG NTRTWPRFPD EAVRLGEVQA VFAVYFRGLG GERAVQIAPA RGRTSAHRLR LRQRMGLGEE KLVQPARDHA TLMLPAEVDL FPSRRLNRDL YFWLAAMMAV MPLKHVGAAD PLSRDLALLS RAGDTVRSVL ASYPAMRQRY RRLCRAVLNV RQRRSLPSVE QHVENRTLSM LRAGAGLNDE MPPVIFPRCA PTGYLPMLPV PLWPDVLLRE ETERRNGEDE PARGGDRAEG SETTRHVATR EAQRQSERSP FILNRFEKIL AMAEMVNVDR PADDSDDHDA SAADELDDMT LGERKGRPAA RFRFDLDLPP EALDRTPLMA ELTYPEWDYR GGGYLKDHCR VLAAPASAEG LPVEADPTTK SLIRRVRRQF EVLRPRHEML RAQIDGADLD LDAVVRARTD LRAGGQGSDR IHMMSRPQAH DLAVTILMDV SLSTDAWFDD LRVLDVEKQA LQVLAHGLSA CGDAHEILTF TSRRRDWVRI ETVKAFDEAM SATIEARIAA LKPGYYTRMG AAIRHAAARL VERPNRRKLL IVLTDGKPND VDHYEGRFAL EDSRRAVGET RRSGISVFGV TVDREAKSYV PVIFGQNGYA VVSNIGRLPA ALPAIYRGLV S
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