Gene Smed_6277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6277 
Symbol 
ID5320579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1195820 
End bp1196734 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID640777876 
Producthypothetical protein 
Protein accessionYP_001314808 
Protein GI150378213 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.11907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.121957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAC TTTCCAGAAG CAGAGAAGTC GCTCCCCTCT CGCTTGCAAT ACCCTCCGCG 
CTCCTTTTGG TTCTCGCGGG GCTTTTCGCA ATTGAGACAG GGCTGCTGGG CAGGGCTCCG
TCGGGCAGCG CCCTCGACGA GCCGGCTGTC GTGACCGTCG TCCCGCGAGA TTTCCGGTAC
CGCGTCGCCG GGGAGTTCTT CAAGAACGGC TATGCCGTCG ACGGGCCGGT GGAGACGGTG
CGCGTGAGCG CGCCGCTCGT CATCATGAAA TACCAAGTGA CCGCCGCCGA CTACGCGCGC
TGCGTCGCGG AAAAGGCATG CCCGCCGGCC GAACCCGAGC ACGTACCCCG AGATCCTGCA
AGCACGCCGG CAACGGGCGT CAGCTTCGAC GATGCGCAAG CCTATGCCGC CTGGCTCAGC
CGACGAACCG GCGAAACCTG GGTGCTGCCG ACGGATGAGC AGCTTGCCTT TGCGGCCGGC
AGTCGTTTTC CCGACGACGC GCTCGGCGTC GAGGACGACG GGTCCAATCC AGCCGTGCGG
TGGCTAGCCG ACTACTACCG CGAAACGGCG CGCAAGGCGT CCCGCGAGCC GGAACCGCAG
CGGCTCGGAC ATTTCGGCGA GAGCGAGACG GGCCTCGCCG ACTTTGCCGG CAATGTGTGG
GAATGGACCA CGACCTGCGT TAGGCGTGTC ACCCTCGACC GCACAGGCAA CGTTACCAGC
GACGACTCAT CCTGCGGCAT CTACATCGCA ACCGGCAAGC ATCGGGCCGC GCTCAGTTCC
TTTGTCCGCA ACCCTAAGGG GGGCGGCTGC GCAGTCGGCG CGCCACCGGA CAACGTGGGC
TTCCGCCTGG TGAAGGATAA GCGGTGGTAT GCACTCTTGC TGCTGAGGCT CCGTGAGAAG
GGCCTCGACG TCTGA
 
Protein sequence
MAALSRSREV APLSLAIPSA LLLVLAGLFA IETGLLGRAP SGSALDEPAV VTVVPRDFRY 
RVAGEFFKNG YAVDGPVETV RVSAPLVIMK YQVTAADYAR CVAEKACPPA EPEHVPRDPA
STPATGVSFD DAQAYAAWLS RRTGETWVLP TDEQLAFAAG SRFPDDALGV EDDGSNPAVR
WLADYYRETA RKASREPEPQ RLGHFGESET GLADFAGNVW EWTTTCVRRV TLDRTGNVTS
DDSSCGIYIA TGKHRAALSS FVRNPKGGGC AVGAPPDNVG FRLVKDKRWY ALLLLRLREK
GLDV