Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6259 |
Symbol | |
ID | 5320561 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 1179221 |
End bp | 1180002 |
Gene Length | 782 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640777859 |
Product | hypothetical protein |
Protein accession | YP_001314791 |
Protein GI | 150378196 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.147576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCACGCG GCGACCTTTC GGATATGGAA TGGCGGATCA TCGAGGGGCT GCTGCCCACC GAACGCGGCA GGAAGTCTCG GCCCGCGCAT GACAATCGGC AATATCTGAA CGGCATGCTG CATGTTCTTC GGGTCGGCTG CCCCTGGCGC GATATGCATG AGCGCTACGG AAAGTGGAAT TCGGTCTATG TGCGCTTCCG CCGTTGGGCC GAGCAAGGCG TTTGGGATGC TCTCCTTGAG ACCCTCGTCG AACTCGGGCT GACGGATGAC TGGCAGCACA TGATCGACAG CACCACGGTT CGCGGCCACT CGCAGGCTGC GGGCGCAAAA GGGGGACTTA TCAGGAGGCT TTTGGTCGAT CACGCGGCGG CTTTACGACG AAAATCCACG CCCGCGCAGA CGGTCAAGGA CGCCCTCTCG GTTTCATCCT GACCGGTGGC GAGGCTTCGG ATTACAATGC CGTTCCTGAT CTGCTGGCGA TACCGGTCAG CAAACCGAGA TTGTTTCTGG CCGACAAAGG TTATGACGGC GACTTCCTGC GTGAGGAACT GCTGATCCAC GGCATCAGGC CGGTCATTCC ACCAAAGGCC AACAGGAAGA ACCCGCCTGC CTGCGACTTC CGGGCATACA AGGATCGAAA CCGCATCGAA CGGATGTTCA ACCGCCTCAA ACAGTTCCGT CGCATTGCGA CCCGATACGA CAAGACCCGA AAATCCTTCT CAGCATTCCT CGCCCTGGCC GCCGCCAAGA TATGGCTGCC ATACTTTGTC AACGGGACCT AA
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Protein sequence | MARGDLSDME WRIIEGLLPT ERGRKSRPAH DNRQYLNGML HVLRVGCPWR DMHERYGKWN SVYVRFRRWA EQGVWDALLE TLVELGLTDD WQHMIDSTTV RGHSQAAGAK RGTYQEAFGR SRGGFTTKIH ARADGQGRPL GFILTGGEAS DYNAVPDLLA IPVSKPRLFL ADKGYDGDFL REELLIHGIR PVIPPKANRK NPPACDFRAY KDRNRIERMF NRLKQFRRIA TRYDKTRKSF SAFLALAAAK IWLPYFVNGT
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