| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6245 |
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| Symbol | |
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| ID | 5320547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1165205 |
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| End bp | 1166677 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777845 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_001314777 |
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| Protein GI | 150378182 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.584192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTT CGGAAACACT GCTCGTCAAA CTGAAGGATC CCAGCCTCGC TGTCGATAAG
GGTTTGATCG GCGCCGAATG GCTTGACAGA AGCGACAGCG GCAAGACGTT CGATGTCAGC
AATCCGGCGA CCGGCGAGGT CATCGCCATC TTGCCCGACA TGAGTCGGTC CGAAACCGCA
CGTGCGATCG ATGCGGCCCA CGCGGCGCAA AGGGCATGGG CGGAGAAGAC GGGCAAGGAA
CGCGCCGCGG TGCTGCGCAA CCTGTACGAC CTCGTGATTG CCAATGCCGA AGACCTCGCC
ACCATCCTGA CGATGGAAAT GGGTAAGCCG CTTACGGAGG CGAAGGGCGA GATTCTCTAC
GGCGCGTCTT ACGTCGAGTG GTTTGGCGAG GAGGCGAAGC GTGTCTACGG CGACACGATT
CCGGGCCACC AGCCGGACAA GCGCATCATC GTCCTCAAAC AGCCGATCGG GGTCGTGGCG
GCGATCACGC CGTGGAATTT TCCGAATGCG ATGCTCGCCC GAAAACTGGC GCCTGCCGCT
GCCGCAGGCT GCGCAGTGGT TTCGAAGCCT GCCGCGGAGA CGCCGCTGTC GGCACTGGCG
ATAGCCTTGC TCGCAGAGCG CGCCGGCCTG CCTGCCGGAG TCTTCAACGT TATCCTGTCG
ACCGATTCCG CGGAAGTTGG CAAGGAAATG TGTGCCAATG ACAAGGTTCG CAAGCTGACC
TTCACCGGCT CCACCAATGT CGGCAAAATA TTGATGCGCC AGGGCGCCGA CCAGATCATG
AAGCTGGGCT TGGAACTCGG AGGCAACGCG CCGTTCATCG TCTTTGACGA CGCCGATCTC
GACGCCGCTG TCGAAGGCGC CATGGTCGCC AAGTACCGCA ACAACGGGCA GACCTGCGTC
TGCGCCAATA GGCTTTTCGT GCAGGCCGGA ATTTACGACG CCTTTGCCGC GAGGCTGACT
GCCAAGGTTA GCGAGATGAC GATCGGCGAC GGGTTTGAGC CGGACGTCGA CGCTGGCCCG
CTGATCTCGG AAAAGGCTCT CGCCAAGGTC GAGGAACATA TCCGGGACGC CGTGACGAAG
GGTGCCGATC TGGTTCTGGG CGGCAATGCG CGGGGCGGTT TGTTTTTCGA GCCGACCGTC
CTGACCGGAG CCACCATGGA CATGAAGATT GCTCGCGAGG AGACGTTCGG TCCCGTCGCG
CCGCTCTTCA AGTTCGAGAC CGAGAATGAA GTTGTCAGTA TGGCCAACAA CACCGAGTTC
GGCTTAGCAT CCTATTTTTA CTCCAAGGAT GTGAGTAAGG TATTCCGCGT GGCGGAAGCG
CTAGAATACG GCATGGTGGG CATCAATACA GGCCTGATCT CTACGGAAGT AGCTCCCTTC
GGCGGTGTCA AGCAGTCGGG GCAAGGCCGC GAAGGCTCCA AATACGGCAT CGATGACTAT
GTGGAAACCA AGTATCTTTG CCTCAGTATT TGA
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| Protein sequence | MTISETLLVK LKDPSLAVDK GLIGAEWLDR SDSGKTFDVS NPATGEVIAI LPDMSRSETA
RAIDAAHAAQ RAWAEKTGKE RAAVLRNLYD LVIANAEDLA TILTMEMGKP LTEAKGEILY
GASYVEWFGE EAKRVYGDTI PGHQPDKRII VLKQPIGVVA AITPWNFPNA MLARKLAPAA
AAGCAVVSKP AAETPLSALA IALLAERAGL PAGVFNVILS TDSAEVGKEM CANDKVRKLT
FTGSTNVGKI LMRQGADQIM KLGLELGGNA PFIVFDDADL DAAVEGAMVA KYRNNGQTCV
CANRLFVQAG IYDAFAARLT AKVSEMTIGD GFEPDVDAGP LISEKALAKV EEHIRDAVTK
GADLVLGGNA RGGLFFEPTV LTGATMDMKI AREETFGPVA PLFKFETENE VVSMANNTEF
GLASYFYSKD VSKVFRVAEA LEYGMVGINT GLISTEVAPF GGVKQSGQGR EGSKYGIDDY
VETKYLCLSI
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