| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6236 |
|---|
| Symbol | |
|---|
| ID | 5320538 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | - |
|---|
| Start bp | 1157413 |
|---|
| End bp | 1158718 |
|---|
| Gene Length | 1306 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 64% |
|---|
| IMG OID | 640743473 |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAAG AACGCACCGT CCAAGCCAGC ATATTTGATC TTTTCGCCGA ACACGAGATC
GGTCGTGAAC TGAAGGCGAT GTCGGAATGG CTGGATGAGC ATGGCGATTT GCTCGGGCTG
GTGGCGCGGG ACCTGCGCCG GCATGGTCTC AGACAGACCG GCCGCGAGGG GCTACCAGCC
GAGGCTGTGC TGCGCTGCGC TGCTCAAGCA GCATCGCCAG TTGAGTTACC AGGAACTGGC
CTTCCACCTC GAAGACTCCG CCTCGTTCCG GGCGTTTGCC CGGCTGCCGT GGGGCTGGAA
CCCGAAGAAG TCGGTTTTGC ACAAGACGAT CAGCGCGATC CGGGCGCAAA CCTTTGAAGA
GATCAACGGG GTGCTGCTGG CGAGCGCCCG GCAGGAGAAG CTGGAAAGTG GCAAGGTCGT
GCGCGTGGAC AGCACCGTTA CCGCCGCACT GATCCATGAA CCGAGCGACA GCAGCCTGTT
ATGAGACGCT GTCCGGGTGA CGGTGCGGCT GTTGCAGCAG GTCCGAGGCA CTGGGTAGCG
CCATTCCATG GCACGACCAT CGCCGCGCGG CAAAGAAGCG GGCTCGGGCG ATCGAATATA
TCCGCTGCCG CCCCAAACGG ATCAAGCACT ACCGCGAACT GCTCAAGATC ACGCGCACGA
CCTTGAGTTA TCTGCAGCAG GCCAGTGAAC AGTTGCCGCT GACGGCGGGC CCGGCCGGCG
AACTGTGGCA GGCCCAACTC CGCCACTACC GGCCGCTGAT CGAGCGGATC ATCGCCCAGA
CCGAACGGCG GGTCCTGGCC GGGGAGCCGG TTTCGGCCGG CGAGAAGCTG GTGAGCCTGT
TCGAGCCGCA TGGCGACATC ATCGTCAAGG GCAGCCGCGA CGTCGACTAC GGCCACAAAC
TCAATCTGAC CACCGGCAGA AGCGGACTGA TCCTCGACCT CGTCGGCAAC CCGACCGACA
GCGAGCGCTT GCTGCCGATG CTGGAACGCC ACATCGCCTT TTACGGCGAG CCGCCGCGTC
AGGCGGCGGC CGACGGCGGC TATGCCAGCC GCGAAAATCT GAGCGGAGCG ACATGGCTTT
CCACAAGAAG CGCGGCCTCA GCATCGAAGA CATGGTCAGC AGCCGGTGGG TCTATCGCAA
GCTGCGCAAC TTCCGCGCCG GCATCGAGGC CGGCATCTCT TGCCTGAAAC GCGCTTATGG
CTTGGGGCGC TGCACCTGGC GTGGGCTCGA CCACTTCAAG GCTTATGTCT GGTCCTCGGT
GGTCGCTTAC AATCTCGCCC TCTTCGCCCG CCTCAGGCCG ACCTGA
|
|---|
| Protein sequence | |
|---|
| |